RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 KLHL32Q96NJ5 620 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 GCNAQ96QF7 691 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 HGH1Q9BTY7 390 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 ATP13A3Q9H7F0 1226 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 ABCB8Q9NUT2 735 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 EIF2B4Q9UI10 523 aaKnown RBP12.91□□□□□ -0.34
GARNL3-220ENST00000496711 RIMS3Q9UJD0 308 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 GNPTGQ9UJJ9 305 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 APPL1Q9UKG1 709 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 DTNAQ9Y4J8 743 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 PRSS51A0A1B0GVH4 220 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 E2F3O00716 465 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 FGF18O76093 207 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 PRR35P0CG20 571 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 UQCRBP14927 111 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 SERPINA4P29622 427 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 ATXN3P54252 364 aaPredicted RBP12.91□□□□□ -0.34
GARNL3-220ENST00000496711 RALGDSQ12967 914 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 XKR7Q5GH72 579 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 SAMD4BQ5PRF9 694 aaKnown RBP12.91□□□□□ -0.34
GARNL3-220ENST00000496711 LAYNQ6UX15 382 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 CCDC149Q6ZUS6 474 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 GPRIN3Q6ZVF9 776 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 APLFQ8IW19 511 aaPredicted RBP12.91□□□□□ -0.34
GARNL3-220ENST00000496711 ELMOD1Q8N336 334 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 FIBCD1Q8N539 461 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 RIN3Q8TB24 985 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 ZNF382Q96SR6 550 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 ASB8Q9H765 288 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 PFDN4Q9NQP4 134 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 SDR39U1Q9NRG7 319 aaPredicted RBP12.91□□□□□ -0.34
GARNL3-220ENST00000496711 DLGAP2Q9P1A6 1054 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 TMEM181Q9P2C4 612 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 CLEC4EQ9ULY5 219 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 NDUFAF1Q9Y375 327 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 TIMM22Q9Y584 194 aa12.91□□□□□ -0.34
GARNL3-220ENST00000496711 MYOFQ9NZM1 2061 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 A0A1W2PRU2 124 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 DPPA5A6NC42 116 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 ANGPT2O15123 496 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 TIMP1P01033 207 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 C8AP07357 584 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 C8BP07358 591 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 PRDX3P30048 256 aaKnown RBP12.9□□□□□ -0.34
GARNL3-220ENST00000496711 GKP32189 559 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 HNF1BP35680 557 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 MRPL19P49406 292 aaKnown RBP12.9□□□□□ -0.34
GARNL3-220ENST00000496711 NME5P56597 212 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 ECT2LQ008S8 904 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 TRAP1Q12931 704 aaKnown RBP12.9□□□□□ -0.34
GARNL3-220ENST00000496711 NFATC2Q13469 925 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 LYPLAL1Q5VWZ2 237 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 SPATA19Q7Z5L4 167 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 ICA1LQ8NDH6 482 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 CATSPER1Q8NEC5 780 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 OR2AP1Q8NGE2 309 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 PLEKHG4BQ96PX9 1271 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 BTBD9Q96Q07 612 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 CIPCQ9C0C6 399 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 TNKS2Q9H2K2 1166 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 CD300AQ9UGN4 299 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 ZNF225Q9UK10 706 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 ASB1Q9Y576 335 aa12.9□□□□□ -0.34
GARNL3-220ENST00000496711 TRBV5-4A0A0C4DH59 114 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 GLYATL1P3A0A0U1RQE8 302 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 CXorf51AA0A1B0GTR3 108 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 PRORSD1PA6NEY8 169 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 LEFTY2O00292 366 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 ZNF821O75541 412 aaPredicted RBP12.89□□□□□ -0.35
GARNL3-220ENST00000496711 CLDN7O95471 211 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 S100BP04271 92 aaPredicted RBP12.89□□□□□ -0.35
GARNL3-220ENST00000496711 CYBBP04839 570 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 UBTFL6P0CB48 400 aaPredicted RBP12.89□□□□□ -0.35
GARNL3-220ENST00000496711 BMP1P13497 986 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 PFKLP17858 780 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 CAPN3P20807 821 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 ITGB8P26012 769 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 ACRV1P26436 265 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 SPAM1P38567 509 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 RGS4P49798 205 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 RPS6KA2Q15349 733 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 CDKN3Q16667 212 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 MAP7D1Q3KQU3 841 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 COQ5Q5HYK3 327 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 PRMT9Q6P2P2 845 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 SBSNQ6UWP8 590 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 RETREG3Q86VR2 466 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 ESAMQ96AP7 390 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 CCDC97Q96F63 343 aaPredicted RBP12.89□□□□□ -0.35
GARNL3-220ENST00000496711 DCUN1D1Q96GG9 259 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 BOCQ9BWV1 1114 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 COPS7BQ9H9Q2 264 aaPredicted RBP12.89□□□□□ -0.35
GARNL3-220ENST00000496711 AIG1Q9NVV5 245 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 INTS6Q9UL03 887 aaKnown RBP12.89□□□□□ -0.35
GARNL3-220ENST00000496711 DOCK6Q96HP0 2047 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 BAIAP3O94812 1187 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 OR4F21O95013 312 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 ADH1AP07327 375 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 LYNP07948 512 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 BPIP17213 487 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms