RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 WDR74Q6RFH5 385 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-209ENST00000496445 ARHGAP22Q7Z5H3 698 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 C11orf96Q7Z7L8 435 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 LRRTM4Q86VH4 590 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 IPMKQ8NFU5 416 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 ART4Q93070 314 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 TAAR9Q96RI9 348 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 SRPK1Q96SB4 655 aaKnown RBP14.07□□□□□ -0.16
VTI1A-209ENST00000496445 VAT1Q99536 393 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 TIMM29Q9BSF4 260 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 GBA3Q9H227 469 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 OSGEPL1Q9H4B0 414 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 STN1Q9H668 368 aaKnown RBP14.07□□□□□ -0.16
VTI1A-209ENST00000496445 IL26Q9NPH9 171 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 IL17CQ9P0M4 197 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 RSPH14Q9UHP6 348 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.07□□□□□ -0.16
VTI1A-209ENST00000496445 B3GALT1Q9Y5Z6 326 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 EPN1Q9Y6I3 576 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-209ENST00000496445 LILRA5A6NI73 299 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 OR5K4A6NMS3 321 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 EFCAB7A8K855 629 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 B4E171 279 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 STMND1H3BQB6 276 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 KMOO15229 486 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 PJA2O43164 708 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 VEGFDO43915 354 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 BRAFP15056 766 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 HLA-DPA1P20036 260 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 CSTF2P33240 577 aaKnown RBP eCLIP14.06□□□□□ -0.16
VTI1A-209ENST00000496445 PTPN7P35236 360 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 SPAM1P38567 509 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 TSPAN7P41732 249 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 MAPK9P45984 424 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 OTUD4Q01804 1114 aaKnown RBP14.06□□□□□ -0.16
VTI1A-209ENST00000496445 MPP3Q13368 585 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 XRCC4Q13426 336 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 OLIG2Q13516 323 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 SEPT7Q16181 437 aaKnown RBP14.06□□□□□ -0.16
VTI1A-209ENST00000496445 SNAP47Q5SQN1 464 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 MANEAQ5SRI9 462 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 TMEM164Q5U3C3 297 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 AADACL2Q6P093 401 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 FAM151BQ6UXP7 276 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 PID1Q7Z2X4 250 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 GLT6D1Q7Z4J2 308 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 FAM129CQ86XR2 697 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 ACRBPQ8NEB7 543 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 ACTL9Q8TC94 416 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 DTX3LQ8TDB6 740 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 BLOC1S5Q8TDH9 187 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 JPH3Q8WXH2 748 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-209ENST00000496445 SH3KBP1Q96B97 665 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 SGF29Q96ES7 293 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 DDA1Q9BW61 102 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 LACRTQ9GZZ8 138 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 TRABDQ9H4I3 376 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 LUC7LQ9NQ29 371 aaKnown RBP14.06□□□□□ -0.16
VTI1A-209ENST00000496445 OGFRQ9NZT2 677 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 ZNF624Q9P2J8 865 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-209ENST00000496445 DNAJC16Q9Y2G8 782 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 PCDHGA4Q9Y5G9 962 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 PCDHA3Q9Y5H8 950 aa14.06□□□□□ -0.16
VTI1A-209ENST00000496445 MN1Q10571 1320 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-209ENST00000496445 TLN1Q9Y490 2541 aaKnown RBP14.06□□□□□ -0.16
VTI1A-209ENST00000496445 A8MU76 341 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 BTNL10A8MVZ5 291 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 H7C0C1 242 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 BUD23O43709 281 aaKnown RBP14.05□□□□□ -0.16
VTI1A-209ENST00000496445 CDK14O94921 469 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 CTNNA2P26232 953 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 SLC19A1P41440 591 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 ATP5OP48047 213 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 PPM1FP49593 454 aaPredicted RBP14.05□□□□□ -0.16
VTI1A-209ENST00000496445 GFERP55789 205 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 COPS2P61201 443 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 PTPRCAPQ14761 206 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 CHRNA6Q15825 494 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 ANKS6Q68DC2 871 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 TMTC1Q8IUR5 882 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 LRRC57Q8N9N7 239 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 CCDC112Q8NEF3 446 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 NCSTNQ92542 709 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 ALG3Q92685 438 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 FAM118BQ9BPY3 351 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 FICDQ9BVA6 458 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.05□□□□□ -0.16
VTI1A-209ENST00000496445 UCK1Q9HA47 277 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 SLC39A1Q9NY26 324 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 HACD3Q9P035 362 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 KLHL3Q9UH77 587 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 TRHDEQ9UKU6 1024 aa14.05□□□□□ -0.16
VTI1A-209ENST00000496445 GLYATL1P3A0A0U1RQE8 302 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 MACROD2A1Z1Q3 448 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 GRID2IPA4D2P6 1211 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 OR52A4PA6NMU1 304 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 PDZK1P1A8MUH7 402 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 UGT1A9O60656 530 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 AGTP01019 485 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 PLA2G2AP14555 144 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms