RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PLEKHA5Q9HAU0 1116 aa9□□□□□ -0.97
HPS4-217ENST00000496385 PXMP2Q9NR77 195 aa9□□□□□ -0.97
HPS4-217ENST00000496385 EIF3KQ9UBQ5 218 aaKnown RBP9□□□□□ -0.97
HPS4-217ENST00000496385 TLR6Q9Y2C9 796 aa9□□□□□ -0.97
HPS4-217ENST00000496385 PCDHGB6Q9Y5F9 930 aa9□□□□□ -0.97
HPS4-217ENST00000496385 HSPE1-MOB4S4R3N1 261 aa9□□□□□ -0.97
HPS4-217ENST00000496385 HNRNPDLO14979 420 aaKnown RBP8.99□□□□□ -0.97
HPS4-217ENST00000496385 PRPSAP2O60256 369 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 TRIM3O75382 744 aaPredicted RBP8.99□□□□□ -0.97
HPS4-217ENST00000496385 EPN2O95208 641 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 PRLP01236 227 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 HMGCRP04035 888 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 HOXC6P09630 235 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 GLULP15104 373 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 CCNCP24863 283 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 HTR1EP28566 365 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 YWHABP31946 246 aaKnown RBP8.99□□□□□ -0.97
HPS4-217ENST00000496385 GGT5P36269 586 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 GRIA1P42261 906 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 ISL1P61371 349 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 PRKCEQ02156 737 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 TNK1Q13470 666 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 IRF5Q13568 498 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 IMPG1Q17R60 797 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 TBRG1Q3YBR2 411 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 PTPN20Q4JDL3 420 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 COLEC12Q5KU26 742 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 TBPL2Q6SJ96 375 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 ZNF517Q6ZMY9 492 aaPredicted RBP8.99□□□□□ -0.97
HPS4-217ENST00000496385 RETREG3Q86VR2 466 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 TCTE3Q8IZS6 198 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 SNAPC3Q92966 411 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 QKIQ96PU8 341 aaKnown RBP eCLIP8.99□□□□□ -0.97
HPS4-217ENST00000496385 TM9SF2Q99805 663 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 MCMBPQ9BTE3 642 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 ALOXE3Q9BYJ1 711 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 DUSP21Q9H596 190 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 NIPAL2Q9H841 368 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 MAP10Q9P2G4 905 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 SLC17A6Q9P2U8 582 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 PCDHA9Q9Y5H5 950 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 A0A0X1KG70 313 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.99□□□□□ -0.97
HPS4-217ENST00000496385 SLC16A6O15403 523 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 NDUFA2O43678 99 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 GOT2P00505 430 aaKnown RBP8.99□□□□□ -0.97
HPS4-217ENST00000496385 ALOX12P18054 663 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 CHRM3P20309 590 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 SLC6A2P23975 617 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 MGAT1P26572 445 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 ETV1P50549 477 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 CLCA4Q14CN2 919 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 MEP1AQ16819 746 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 DDR2Q16832 855 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 FAM182AQ5T1J6 154 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 FAM102BQ5T8I3 360 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 LAYNQ6UX15 382 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 XYLT1Q86Y38 959 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 ZDHHC13Q8IUH4 622 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 SETD9Q8NE22 299 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 FAM83FQ8NEG4 500 aaPredicted RBP8.99□□□□□ -0.97
HPS4-217ENST00000496385 LRRC20Q8TCA0 184 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 NSUN6Q8TEA1 469 aaKnown RBP8.99□□□□□ -0.97
HPS4-217ENST00000496385 REXO4Q9GZR2 422 aaKnown RBP8.99□□□□□ -0.97
HPS4-217ENST00000496385 RNF208Q9H0X6 261 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 DCSTAMPQ9H295 470 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 TOR3AQ9H497 397 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 CMTM6Q9NX76 183 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 EHD3Q9NZN3 535 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 EGFL7Q9UHF1 273 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 TRMT6Q9UJA5 497 aaKnown RBP8.99□□□□□ -0.97
HPS4-217ENST00000496385 C3orf18Q9UK00 162 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 SNX7Q9UNH6 387 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 HCN4Q9Y3Q4 1203 aa8.99□□□□□ -0.97
HPS4-217ENST00000496385 KRT87PA6NCN2 255 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 FAM25EA8MYX2 175 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 EFCAB9A8MZ26 197 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 LEUTXA8MZ59 168 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 UPK1AO00322 258 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 DLX3O60479 287 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 MATN4O95460 622 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 ASS1P00966 412 aaKnown RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 NR3C2P08235 984 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 ERVK-10P10266 1014 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 ARP10275 920 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 FOSL1P15407 271 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 HOXB6P17509 224 aaKnown RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 GPX3P22352 226 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 ARNTP27540 789 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 ADCYAP1R1P41586 468 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 MLLT3P42568 568 aaPredicted RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 MAP3K7CLP57077 242 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 IRF9Q00978 393 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 PGM5Q15124 567 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 ZIK1Q3SY52 487 aaPredicted RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 GPAT3Q53EU6 434 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 ZNF691Q5VV52 312 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 MFSD14CQ5VZR4 134 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 HEATR6Q6AI08 1181 aaKnown RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 SLFN12LQ6IEE8 588 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms