RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 AHCYL2Q96HN2 611 aaKnown RBP15.51■□□□□ 0.07
HDAC4-213ENST00000496347 DESI2Q9BSY9 194 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 FICDQ9BVA6 458 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.51■□□□□ 0.07
HDAC4-213ENST00000496347 OSGEPL1Q9H4B0 414 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 UCK1Q9HA47 277 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 BPIFA1Q9NP55 256 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 ARFGAP3Q9NP61 516 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.51■□□□□ 0.07
HDAC4-213ENST00000496347 CPNE7Q9UBL6 633 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 COL6A6A6NMZ7 2263 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 SDK2Q58EX2 2172 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 PIEZO2Q9H5I5 2752 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 GLYATL1P3A0A0U1RQE8 302 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 PRR19A6NJB7 356 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 MTX2O75431 263 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 CDK14O94921 469 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 LIPCP11150 499 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 PYGMP11217 842 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 ZNF7P17097 686 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-213ENST00000496347 ITIH1P19827 911 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 UBE2IP63279 158 aaKnown RBP15.5■□□□□ 0.07
HDAC4-213ENST00000496347 KHDC1Q4VXA5 237 aaKnown RBP15.5■□□□□ 0.07
HDAC4-213ENST00000496347 ANKRD20A2Q5SQ80 823 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 LDLRAP1Q5SW96 308 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 ZNF648Q5T619 568 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-213ENST00000496347 ANKRD20A1Q5TYW2 823 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 TMEM164Q5U3C3 297 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 ANKRD20A3Q5VUR7 823 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 NKAIN2Q5VXU1 208 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 DARS2Q6PI48 645 aaKnown RBP15.5■□□□□ 0.07
HDAC4-213ENST00000496347 FAM151BQ6UXP7 276 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 ZNF574Q6ZN55 896 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-213ENST00000496347 USP53Q70EK8 1073 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 TRAPPC5Q8IUR0 188 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 ZNF547Q8IVP9 402 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 AGBL5Q8NDL9 886 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 C19orf43Q9BQ61 176 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 TSGA10Q9BZW7 698 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 KLC4Q9NSK0 619 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 TRIM10Q9UDY6 481 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 FEZ2Q9UHY8 353 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-213ENST00000496347 SPTA1P02549 2419 aa15.5■□□□□ 0.07
HDAC4-213ENST00000496347 PRAMEF33A0A0G2JMD5 474 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-213ENST00000496347 TK2O00142 265 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 ATXN7O15265 892 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-213ENST00000496347 SNX2O60749 519 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 PRAMEF10O60809 474 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 PRAMEF1O95521 474 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 ADRA1AP35348 466 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 GSDMDP57764 484 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 PDE1BQ01064 536 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 VAC14Q08AM6 782 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 KLF1Q13351 362 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-213ENST00000496347 NFATC2Q13469 925 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 TAF1AQ15573 450 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-213ENST00000496347 PLA2G4EQ3MJ16 856 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 AGAP9Q5VTM2 703 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 TMEM71Q6P5X7 295 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 WASH2PQ6VEQ5 465 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 RANBP10Q6VN20 620 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 ZNF761Q86XN6 746 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-213ENST00000496347 KLHDC8BQ8IXV7 354 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 SPC24Q8NBT2 197 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 LSM14AQ8ND56 463 aaKnown RBP15.49■□□□□ 0.07
HDAC4-213ENST00000496347 RCBTB1Q8NDN9 531 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 GDAP1Q8TB36 358 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 UBE2Q2Q8WVN8 375 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 C10orf88Q9H8K7 445 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 WASH6PQ9NQA3 447 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 PRDM8Q9NQV8 689 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 POT1Q9NUX5 634 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 PDP2Q9P2J9 529 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 TMPRSS11EQ9UL52 423 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 PCDHGA3Q9Y5H0 932 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 CAPN6Q9Y6Q1 641 aa15.49■□□□□ 0.07
HDAC4-213ENST00000496347 MN1Q10571 1320 aaPredicted RBP15.48■□□□□ 0.07
HDAC4-213ENST00000496347 C5orf60A6NFR6 353 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 C2orf81A6NN90 581 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 PDZK1P1A8MUH7 402 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 ERVH48-1M5A8F1 160 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 GAPDHSO14556 408 aaPredicted RBP15.48■□□□□ 0.07
HDAC4-213ENST00000496347 STX7O15400 261 aaKnown RBP15.48■□□□□ 0.07
HDAC4-213ENST00000496347 KCNJ13O60928 360 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 FTCDO95954 541 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 HOXB3P14651 431 aaPredicted RBP15.48■□□□□ 0.07
HDAC4-213ENST00000496347 LPOP22079 712 aaPredicted RBP15.48■□□□□ 0.07
HDAC4-213ENST00000496347 CSTF2P33240 577 aaKnown RBP eCLIP15.48■□□□□ 0.07
HDAC4-213ENST00000496347 ETV5P41161 510 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 RAB15P59190 212 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 RHDQ02161 417 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 CFHR1Q03591 330 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 DMPKQ09013 629 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 CHRNA6Q15825 494 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 P3H1Q32P28 736 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 AADACL2Q6P093 401 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 TRIM48Q8IWZ4 208 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 RNF10Q8N5U6 811 aaKnown RBP15.48■□□□□ 0.07
HDAC4-213ENST00000496347 CCDC110Q8TBZ0 833 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms