RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 PPP6CO00743 305 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 KLK8O60259 260 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 SUPT3HO75486 399 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 SLC25A14O95258 325 aaPredicted RBP13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 TRIM16O95361 564 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 CYP2A6P11509 494 aaPredicted RBP13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 CALB2P22676 271 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 EPHA3P29320 983 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 ETV3P41162 512 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 CDH13P55290 713 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 ZNF234Q14588 700 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 Q6ZVL8 140 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 FGF14Q92915 247 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 PDLIM5Q96HC4 596 aaKnown RBP13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 MIPEPQ99797 713 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 TUBB6Q9BUF5 446 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 TCF7L2Q9NQB0 619 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 PPM1HQ9ULR3 514 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 SORCS3Q9UPU3 1222 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 SPTBN5Q9NRC6 3674 aaKnown RBP13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 CCDC189A1A4V9 331 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 E9PBE3 544 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 NEMP1O14524 444 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 SPINT1O43278 529 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 KLHL41O60662 606 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 TBX10O75333 385 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 ENO1P06733 434 aaKnown RBP13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 LAMP2P13473 410 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 GFAPP14136 432 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 AOC1P19801 751 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 PTPN4P29074 926 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 MMP12P39900 470 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 NSG1P42857 185 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 ELF3P78545 371 aaPredicted RBP13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 GRIN2CQ14957 1233 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 PDCD2Q16342 344 aaPredicted RBP13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 LSM12Q3MHD2 195 aaKnown RBP13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 FBXO48Q5FWF7 155 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 GPRC6AQ5T6X5 926 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 DPPA4Q7L190 304 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 CPA6Q8N4T0 437 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 NSUN5Q96P11 429 aaKnown RBP13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 COPS8Q99627 209 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 TRMOQ9BU70 441 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 EML4Q9HC35 981 aaKnown RBP13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 PKD2L2Q9NZM6 624 aa13.52□□□□□ -0.25
SPTBN1-205ENST00000496323 TBC1D3BA6NDS4 549 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 NCF1BA6NI72 391 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 NCF1CA8MVU1 366 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 KPNA3O00505 521 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 NCF1P14598 390 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 GM2AP17900 193 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 PSMC3P17980 439 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 SH3BP2P78314 561 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 FBXO39Q8N4B4 442 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 STON2Q8WXE9 905 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 FAM129BQ96TA1 746 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 TBC1D10AQ9BXI6 508 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 FAM83DQ9H4H8 585 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 ZDHHC4Q9NPG8 344 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 TSR3Q9UJK0 312 aaKnown RBP13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 ITM2BQ9Y287 266 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 COL4A3Q01955 1670 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 EDDM13A0A1B0GTR0 161 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 SYCE1LA8MT33 242 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 HNRNPCL1O60812 293 aaKnown RBP13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 PRNPP04156 253 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 ESRRAP11474 423 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 EEF1DP29692 281 aaKnown RBP13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 CPA2P48052 419 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 AGTR2P50052 363 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 RASSF2P50749 326 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 DCDC1P59894 354 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 ACSBG2Q5FVE4 666 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 COL13A1Q5TAT6 717 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 METTL21CQ5VZV1 264 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 SBSNQ6UWP8 590 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 RINLQ6ZS11 566 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 TECPR1Q7Z6L1 1165 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 GPSM1Q86YR5 675 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 ARRDC3Q96B67 414 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 ELSPBP1Q96BH3 223 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 MAELQ96JY0 434 aaKnown RBP13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 ACOX2Q99424 681 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 SPATA16Q9BXB7 569 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 TRAF6Q9Y4K3 522 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 SCN8AQ9UQD0 1980 aa13.51□□□□□ -0.25
SPTBN1-205ENST00000496323 A0A1B0GTL3 188 aa13.5□□□□□ -0.25
SPTBN1-205ENST00000496323 ARNTLO00327 626 aa13.5□□□□□ -0.25
SPTBN1-205ENST00000496323 SDHDO14521 159 aa13.5□□□□□ -0.25
SPTBN1-205ENST00000496323 CDK14O94921 469 aa13.5□□□□□ -0.25
SPTBN1-205ENST00000496323 NCF2P19878 526 aaPredicted RBP13.5□□□□□ -0.25
SPTBN1-205ENST00000496323 XPAP23025 273 aaPredicted RBP13.5□□□□□ -0.25
SPTBN1-205ENST00000496323 IL12RB1P42701 662 aa13.5□□□□□ -0.25
SPTBN1-205ENST00000496323 BTKQ06187 659 aa13.5□□□□□ -0.25
SPTBN1-205ENST00000496323 ELAVL3Q14576 367 aaKnown RBP13.5□□□□□ -0.25
SPTBN1-205ENST00000496323 TBCCQ15814 346 aa13.5□□□□□ -0.25
SPTBN1-205ENST00000496323 HENMT1Q5T8I9 393 aaKnown RBP13.5□□□□□ -0.25
SPTBN1-205ENST00000496323 CLEC6AQ6EIG7 209 aa13.5□□□□□ -0.25
SPTBN1-205ENST00000496323 CYB5D1Q6P9G0 228 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms