RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 CLCNKAP51800 687 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 HHEXQ03014 270 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 EIF3IQ13347 325 aaKnown RBP20.34■□□□□ 0.85
COL9A2-211ENST00000496215 SNX1Q13596 522 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 CLPPQ16740 277 aaPredicted RBP20.34■□□□□ 0.85
COL9A2-211ENST00000496215 COL28A1Q2UY09 1125 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 GPRC6AQ5T6X5 926 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 FOXR1Q6PIV2 292 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 IGF2-ASQ6U949 168 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 TMPRSS9Q7Z410 1059 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 ZNF547Q8IVP9 402 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 AVL9Q8NBF6 648 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 HNRNPLLQ8WVV9 542 aaKnown RBP20.34■□□□□ 0.85
COL9A2-211ENST00000496215 MAIP1Q8WWC4 291 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 ZNF578Q96N58 590 aaPredicted RBP20.34■□□□□ 0.85
COL9A2-211ENST00000496215 UGT1A7Q9HAW7 530 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 UGT1A10Q9HAW8 530 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 UGT1A8Q9HAW9 530 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 SARS2Q9NP81 518 aaKnown RBP20.34■□□□□ 0.85
COL9A2-211ENST00000496215 ASCL3Q9NQ33 180 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 THSD1Q9NS62 852 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 KCNK4Q9NYG8 393 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 DNAJC16Q9Y2G8 782 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 KCTD3Q9Y597 815 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 PCDHGA8Q9Y5G5 932 aa20.34■□□□□ 0.85
COL9A2-211ENST00000496215 UNC13CQ8NB66 2214 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 TRBV23OR9-2A0A075B6M9 112 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 KIR2DS5A0A0G2JLQ3 304 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 A0A0G2JNG1 304 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 ERI2A8K979 691 aaKnown RBP20.33■□□□□ 0.85
COL9A2-211ENST00000496215 KIR2DS3K7RE56 304 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 B4GAT1O43505 415 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 SRP72O76094 671 aaKnown RBP20.33■□□□□ 0.85
COL9A2-211ENST00000496215 FGGP02679 453 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 HADHAP40939 763 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 EIF2S3P41091 472 aaKnown RBP20.33■□□□□ 0.85
COL9A2-211ENST00000496215 MSLNQ13421 630 aaPredicted RBP20.33■□□□□ 0.85
COL9A2-211ENST00000496215 SEPT6Q14141 434 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 KIR2DS5Q14953 304 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.33■□□□□ 0.85
COL9A2-211ENST00000496215 IYDQ6PHW0 289 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 LINC00523Q86TU6 105 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 SLC9B2Q86UD5 537 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 PIM3Q86V86 326 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 CCDC89Q8N998 374 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 OR13C4Q8NGS5 318 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 ZNF398Q8TD17 642 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 FGF11Q92914 225 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 SLC38A3Q99624 504 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 C19orf43Q9BQ61 176 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 RDH14Q9HBH5 336 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 SLC23A2Q9UGH3 650 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 LHX6Q9UPM6 363 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 ZKSCAN5Q9Y2L8 839 aa20.33■□□□□ 0.85
COL9A2-211ENST00000496215 IGHV1OR21-1A0A087WYE8 117 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 OR5K4A6NMS3 321 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 PDZK1P1A8MUH7 402 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 MSH3P20585 1137 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 ITPKBP27987 946 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 FDFT1P37268 417 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 MLLT3P42568 568 aaPredicted RBP20.32■□□□□ 0.84
COL9A2-211ENST00000496215 PPM1FP49593 454 aaPredicted RBP20.32■□□□□ 0.84
COL9A2-211ENST00000496215 PCBP4P57723 403 aaKnown RBP20.32■□□□□ 0.84
COL9A2-211ENST00000496215 ERVPABLB-1P60509 514 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 GPLD1P80108 840 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 TMPRSS15P98073 1019 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 NFATC2Q13469 925 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 SIX1Q15475 284 aaPredicted RBP20.32■□□□□ 0.84
COL9A2-211ENST00000496215 SEPT7Q16181 437 aaKnown RBP20.32■□□□□ 0.84
COL9A2-211ENST00000496215 PHF19Q5T6S3 580 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 RAB11FIP2Q7L804 512 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 ZNF761Q86XN6 746 aaPredicted RBP20.32■□□□□ 0.84
COL9A2-211ENST00000496215 SLITRK4Q8IW52 837 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 NUDT22Q9BRQ3 303 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 ASB8Q9H765 288 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 PRDM8Q9NQV8 689 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 CRLS1Q9UJA2 301 aa20.32■□□□□ 0.84
COL9A2-211ENST00000496215 E7EVH7 732 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 PLD2O14939 933 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 RRP8O43159 456 aaKnown RBP20.31■□□□□ 0.84
COL9A2-211ENST00000496215 LDB2O43679 373 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 DUX1O43812 170 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 CEP104O60308 925 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 ITGALP20701 1170 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 CA5AP35218 305 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 LMAN1P49257 510 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 ZFP36L1Q07352 338 aaKnown RBP20.31■□□□□ 0.84
COL9A2-211ENST00000496215 POU6F1Q14863 301 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 CCNG2Q16589 344 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 LONRF2Q1L5Z9 754 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 LRRC69Q6ZNQ3 347 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 C11orf96Q7Z7L8 435 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 RASGEF1AQ8N9B8 481 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 OR10G6Q8NH81 332 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 ANP32BQ92688 251 aaKnown RBP20.31■□□□□ 0.84
COL9A2-211ENST00000496215 SH3KBP1Q96B97 665 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 ULK4Q96C45 1275 aa20.31■□□□□ 0.84
COL9A2-211ENST00000496215 DNAJC1Q96KC8 554 aaKnown RBP20.31■□□□□ 0.84
COL9A2-211ENST00000496215 PIH1D1Q9NWS0 290 aaKnown RBP20.31■□□□□ 0.84
COL9A2-211ENST00000496215 PAK5Q9P286 719 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms