RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 GPR33Q49SQ1 333 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 C6orf132Q5T0Z8 1188 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 AFTPHQ6ULP2 937 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 LRRTM4Q86VH4 590 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 OR4L1Q8NH43 312 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 SGF29Q96ES7 293 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 LRRC1Q9BTT6 524 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 DUSP23Q9BVJ7 150 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 MRM3Q9HC36 420 aaKnown RBP19.18■□□□□ 0.66
HDAC4-212ENST00000495497 TAAR2Q9P1P5 351 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 GULP1Q9UBP9 304 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 KCNK6Q9Y257 313 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 MAD1L1Q9Y6D9 718 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 U3KQA8 63 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 B4DGG1 531 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 TNFSF14O43557 240 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 ACRV1P26436 265 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 SLC7A5Q01650 507 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 TUBB2AQ13885 445 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 SEMA3AQ14563 771 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 TRADDQ15628 312 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 DBN1Q16643 649 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 BBS9Q3SYG4 887 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 CCDC157Q569K6 752 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 DUPD1Q68J44 220 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 ZCCHC8Q6NZY4 707 aaKnown RBP19.17■□□□□ 0.66
HDAC4-212ENST00000495497 DGLUCYQ7Z3D6 616 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 LDB1Q86U70 411 aaPredicted RBP19.17■□□□□ 0.66
HDAC4-212ENST00000495497 SLCO6A1Q86UG4 719 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 TRAPPC5Q8IUR0 188 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 SLC35F3Q8IY50 421 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 BEND7Q8N7W2 519 aaPredicted RBP19.17■□□□□ 0.66
HDAC4-212ENST00000495497 SCG3Q8WXD2 468 aaKnown RBP19.17■□□□□ 0.66
HDAC4-212ENST00000495497 FCRL3Q96P31 734 aaPredicted RBP19.17■□□□□ 0.66
HDAC4-212ENST00000495497 COPS8Q99627 209 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 TUBB2BQ9BVA1 445 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 DPEP2Q9H4A9 486 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 KLC4Q9NSK0 619 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 ZDHHC3Q9NYG2 299 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 SAMD15Q9P1V8 674 aa19.17■□□□□ 0.66
HDAC4-212ENST00000495497 MARCH4Q9P2E8 410 aaPredicted RBP19.17■□□□□ 0.66
HDAC4-212ENST00000495497 ZNF106Q9H2Y7 1883 aaKnown RBP19.17■□□□□ 0.66
HDAC4-212ENST00000495497 GPR89AB7ZAQ6 455 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 GOLGA8KD6RF30 607 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 GOLGA8TH3BQL2 631 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 KMOO15229 486 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 GPR89BP0CG08 455 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 ARNTP27540 789 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 DAB2P98082 770 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 ANKRD20A4Q4UJ75 823 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 FASTKD1Q53R41 847 aaKnown RBP19.16■□□□□ 0.66
HDAC4-212ENST00000495497 HP1BP3Q5SSJ5 553 aaPredicted RBP19.16■□□□□ 0.66
HDAC4-212ENST00000495497 LVRNQ6Q4G3 990 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 C11orf96Q7Z7L8 435 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 IGDCC3Q8IVU1 814 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 SDR16C5Q8N3Y7 309 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 KYQ8NBH2 561 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 NOA1Q8NC60 698 aaKnown RBP19.16■□□□□ 0.66
HDAC4-212ENST00000495497 PATE1Q8WXA2 126 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 PEX13Q92968 403 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 ZNF669Q96BR6 464 aaPredicted RBP19.16■□□□□ 0.66
HDAC4-212ENST00000495497 DCUN1D1Q96GG9 259 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 ZCCHC2Q9C0B9 1178 aaKnown RBP19.16■□□□□ 0.66
HDAC4-212ENST00000495497 TOR4AQ9NXH8 423 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 IL1RAPL1Q9NZN1 696 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 DNAJC16Q9Y2G8 782 aa19.16■□□□□ 0.66
HDAC4-212ENST00000495497 PLXNB3Q9ULL4 1909 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 TRBV23OR9-2A0A075B6M9 112 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 FAM237BA0A1B0GVD1 139 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 CTAGE15A4D2H0 777 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 SGTAO43765 313 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 POP7O75817 140 aaKnown RBP19.15■□□□□ 0.66
HDAC4-212ENST00000495497 VAPBO95292 243 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 EML2O95834 649 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 CTAGE8P0CG41 777 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 ZNF7P17097 686 aaPredicted RBP19.15■□□□□ 0.66
HDAC4-212ENST00000495497 CKMT2P17540 419 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 PBLDP30039 288 aaPredicted RBP19.15■□□□□ 0.66
HDAC4-212ENST00000495497 LRP8Q14114 963 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 INSCQ1MX18 579 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 C8orf74Q6P047 294 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 GLRX5Q86SX6 157 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 CTAGE6Q86UF2 777 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 CTAGE4Q8IX94 777 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 MMGT1Q8N4V1 131 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 FAM181AQ8N9Y4 354 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 MNS1Q8NEH6 495 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 ZDHHC1Q8WTX9 485 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 STAMBPL1Q96FJ0 436 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 CATSPERZQ9NTU4 200 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 GRHL1Q9NZI5 618 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 UTP11Q9Y3A2 253 aaKnown RBP19.15■□□□□ 0.66
HDAC4-212ENST00000495497 PRSS21Q9Y6M0 314 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 RPS6KL1Q9Y6S9 549 aa19.15■□□□□ 0.66
HDAC4-212ENST00000495497 IGLV3-16A0A075B6K0 115 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 MAGEB16A2A368 324 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 CD3EAPO15446 510 aaKnown RBP19.14■□□□□ 0.65
HDAC4-212ENST00000495497 NOBOXO60393 691 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 OR1I1O60431 355 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 SNX2O60749 519 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms