RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 FSD1LQ9BXM9 530 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 ZMYND15Q9H091 742 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 RMI1Q9H9A7 625 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 OCIAD1Q9NX40 245 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 NFKBIL1Q9UBC1 381 aaPredicted RBP10.47□□□□□ -0.73
NELFE-213ENST00000494956 KLHL3Q9UH77 587 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 IGSF10Q6WRI0 2623 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 LOC400499M0QZD8 3231 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 TMX2-CTNND1H3BSU7 103 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 CCL22O00626 93 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 CDK14O94921 469 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 EPOP01588 193 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 THRAP10827 490 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 FGF3P11487 239 aaPredicted RBP10.46□□□□□ -0.73
NELFE-213ENST00000494956 F3P13726 295 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 BRAFP15056 766 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 HLA-DPA1P20036 260 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 PBLDP30039 288 aaPredicted RBP10.46□□□□□ -0.73
NELFE-213ENST00000494956 PTPN7P35236 360 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 ADRA1AP35348 466 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 SPAM1P38567 509 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 GPR3P46089 330 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 LIMK2P53671 638 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 GEMP55040 296 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 GDF10P55107 478 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 TMPRSS15P98073 1019 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 TMEM115Q12893 351 aaPredicted RBP10.46□□□□□ -0.73
NELFE-213ENST00000494956 EIF3IQ13347 325 aaKnown RBP10.46□□□□□ -0.73
NELFE-213ENST00000494956 KCTD19Q17RG1 926 aaPredicted RBP10.46□□□□□ -0.73
NELFE-213ENST00000494956 BROXQ5VW32 411 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 C11orf96Q7Z7L8 435 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 VASH2Q86V25 355 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 LRRTM4Q86VH4 590 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 CDKL3Q8IVW4 592 aaPredicted RBP10.46□□□□□ -0.73
NELFE-213ENST00000494956 BEND7Q8N7W2 519 aaPredicted RBP10.46□□□□□ -0.73
NELFE-213ENST00000494956 RASGEF1AQ8N9B8 481 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 OR13C4Q8NGS5 318 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 NCSTNQ92542 709 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 AHCYL2Q96HN2 611 aaKnown RBP10.46□□□□□ -0.73
NELFE-213ENST00000494956 CMKLR1Q99788 373 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 RAD18Q9NS91 495 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 PIH1D1Q9NWS0 290 aaKnown RBP10.46□□□□□ -0.73
NELFE-213ENST00000494956 ZNF624Q9P2J8 865 aaPredicted RBP10.46□□□□□ -0.73
NELFE-213ENST00000494956 FKBPLQ9UIM3 349 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 TRHDEQ9UKU6 1024 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 WDR37Q9Y2I8 494 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 SLC30A1Q9Y6M5 507 aa10.46□□□□□ -0.73
NELFE-213ENST00000494956 GLYATL1P3A0A0U1RQE8 302 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 PRR19A6NJB7 356 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 OR2AG2A6NM03 316 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 OR52A4PA6NMU1 304 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 KMOO15229 486 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 METTL18O95568 372 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 WT1P19544 449 aaPredicted RBP10.45□□□□□ -0.74
NELFE-213ENST00000494956 CDC25BP30305 580 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 SLC19A1P41440 591 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 GFERP55789 205 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 TMPRSS3P57727 454 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 UBE2IP63279 158 aaKnown RBP10.45□□□□□ -0.74
NELFE-213ENST00000494956 KIF5AQ12840 1032 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 MSLNQ13421 630 aaPredicted RBP10.45□□□□□ -0.74
NELFE-213ENST00000494956 PEX6Q13608 980 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 CLCA4Q14CN2 919 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 GPRC6AQ5T6X5 926 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 PDPK2PQ6A1A2 396 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 DENND5AQ6IQ26 1287 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 TMEM71Q6P5X7 295 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 TMEM220Q6QAJ8 160 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 RANBP10Q6VN20 620 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 FAM83HQ6ZRV2 1179 aaPredicted RBP10.45□□□□□ -0.74
NELFE-213ENST00000494956 DET1Q7L5Y6 550 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 PRUNE1Q86TP1 453 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 SLC9B2Q86UD5 537 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 TRAPPC5Q8IUR0 188 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 FAM71DQ8N9W8 422 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 OR4K2Q8NGD2 314 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 OR4D9Q8NGE8 314 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 ATG4AQ8WYN0 398 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 ART4Q93070 314 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 SPATA13Q96N96 652 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 VPS35Q96QK1 796 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 CTRCQ99895 268 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 TMEM121Q9BTD3 319 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 DPH1Q9BZG8 443 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 FAM96AQ9H5X1 160 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 SARS2Q9NP81 518 aaKnown RBP10.45□□□□□ -0.74
NELFE-213ENST00000494956 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.45□□□□□ -0.74
NELFE-213ENST00000494956 OGFRQ9NZT2 677 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 CPNE7Q9UBL6 633 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 FAM8A1Q9UBU6 413 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 PSMD13Q9UNM6 376 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 EFR3BQ9Y2G0 817 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 PKP3Q9Y446 797 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 PCDHGA7Q9Y5G6 932 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 MGAQ8IWI9 3026 aa10.45□□□□□ -0.74
NELFE-213ENST00000494956 CCDC78A2IDD5 438 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 EFCAB7A8K855 629 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 PDZK1P1A8MUH7 402 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 NVLO15381 856 aaKnown RBP10.44□□□□□ -0.74
NELFE-213ENST00000494956 STX7O15400 261 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms