RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 TMEM220Q6QAJ8 160 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 NAPRTQ6XQN6 538 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 CAPN12Q6ZSI9 719 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 ZNF572Q7Z3I7 529 aaPredicted RBP10.98□□□□□ -0.65
APTX-230ENST00000494649 CTAGE6Q86UF2 777 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 ANKMY2Q8IV38 441 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 IGDCC3Q8IVU1 814 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 CTAGE4Q8IX94 777 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 NXPE1Q8N323 547 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 MCUQ8NE86 351 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 DDHD1Q8NEL9 900 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 OR4C6Q8NH72 309 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 APOLD1Q96LR9 279 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 XAB2Q9HCS7 855 aaKnown RBP10.98□□□□□ -0.65
APTX-230ENST00000494649 KLC4Q9NSK0 619 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 TREX1Q9NSU2 369 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 VPS18Q9P253 973 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 SOX13Q9UN79 622 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 GPR34Q9UPC5 381 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 CHMP2BQ9UQN3 213 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 UTP11Q9Y3A2 253 aaKnown RBP10.98□□□□□ -0.65
APTX-230ENST00000494649 PCDHGB2Q9Y5G2 931 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 RPS6KL1Q9Y6S9 549 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 PLXNB3Q9ULL4 1909 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 ZNF106Q9H2Y7 1883 aaKnown RBP10.98□□□□□ -0.65
APTX-230ENST00000494649 CPED1A4D0V7 1026 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 LMO7DNF2Z398 122 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 TUBB4AP04350 444 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 ACRV1P26436 265 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 FOXN2P32314 431 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 DRG2P55039 364 aaKnown RBP10.97□□□□□ -0.65
APTX-230ENST00000494649 CACNG1Q06432 222 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 PUM1Q14671 1186 aaKnown RBP eCLIP10.97□□□□□ -0.65
APTX-230ENST00000494649 FASTKD3Q14CZ7 662 aaKnown RBP10.97□□□□□ -0.65
APTX-230ENST00000494649 DBN1Q16643 649 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 LDLRAP1Q5SW96 308 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 PCGF5Q86SE9 256 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 GKN2Q86XP6 184 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 KYQ8NBH2 561 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 OR4L1Q8NH43 312 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 CFAP36Q96G28 342 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 DCUN1D1Q96GG9 259 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 SIGLEC10Q96LC7 697 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 COPS8Q99627 209 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 WDR83Q9BRX9 315 aaKnown RBP10.97□□□□□ -0.65
APTX-230ENST00000494649 KIFC1Q9BW19 673 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 NLGN3Q9NZ94 848 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 TAAR2Q9P1P5 351 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 PRSS21Q9Y6M0 314 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 FAM187AA6NFU0 413 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 H7C0S8 307 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 ALPPL2P10696 532 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 ITGB6P18564 788 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 MAGEA3P43357 314 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 PLTPP55058 493 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 MAZP56270 477 aaKnown RBP10.97□□□□□ -0.65
APTX-230ENST00000494649 GUCY2DQ02846 1103 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 CALCOCO2Q13137 446 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 MORF4L2Q15014 288 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 INAVAQ3KP66 663 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 FASTKD1Q53R41 847 aaKnown RBP10.97□□□□□ -0.65
APTX-230ENST00000494649 GUSBP11Q6P575 273 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 AFTPHQ6ULP2 937 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 DGLUCYQ7Z3D6 616 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 LRRTM4Q86VH4 590 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 SPNS2Q8IVW8 549 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 SLC35F3Q8IY50 421 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 FSTL5Q8N475 847 aaPredicted RBP10.97□□□□□ -0.65
APTX-230ENST00000494649 LILRA3Q8N6C8 439 aaPredicted RBP10.97□□□□□ -0.65
APTX-230ENST00000494649 FAM136AQ96C01 138 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 STAMBPL1Q96FJ0 436 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 SCARF2Q96GP6 870 aaPredicted RBP10.97□□□□□ -0.65
APTX-230ENST00000494649 GSDMCQ9BYG8 508 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 PRDM8Q9NQV8 689 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 CATSPERZQ9NTU4 200 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 SMOXQ9NWM0 555 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 GRHL1Q9NZI5 618 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 TBC1D29Q9UFV1 150 aa10.97□□□□□ -0.65
APTX-230ENST00000494649 PCNX2A6NKB5 2137 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 LY6G6EA0A0G2JKS1 128 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 ESPNB1AK53 854 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 AP3B1O00203 1094 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 CHUKO15111 745 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 VEGFDO43915 354 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 MLNP12872 115 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 ELK3P41970 407 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 PDIA2Q13087 525 aaKnown RBP10.96□□□□□ -0.65
APTX-230ENST00000494649 NFE2L1Q14494 772 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 BRD3Q15059 726 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 HIF1AQ16665 826 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 ANKRD20A4Q4UJ75 823 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 C6orf132Q5T0Z8 1188 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 DUPD1Q68J44 220 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 NLRP9Q7RTR0 991 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 SLCO6A1Q86UG4 719 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 HOOK3Q86VS8 718 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 ZNF761Q86XN6 746 aaPredicted RBP10.96□□□□□ -0.65
APTX-230ENST00000494649 MARCH9Q86YJ5 346 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 PDIK1LQ8N165 341 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 BAHD1Q8TBE0 780 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms