RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 PDP2Q9P2J9 529 aa15.39■□□□□ 0.05
LIMS2-216ENST00000494613 CPNE7Q9UBL6 633 aa15.39■□□□□ 0.05
LIMS2-216ENST00000494613 AAR2Q9Y312 384 aaKnown RBP15.39■□□□□ 0.05
LIMS2-216ENST00000494613 PKP3Q9Y446 797 aa15.39■□□□□ 0.05
LIMS2-216ENST00000494613 BPTFQ12830 3046 aa15.39■□□□□ 0.05
LIMS2-216ENST00000494613 CACNA1GO43497 2377 aa15.39■□□□□ 0.05
LIMS2-216ENST00000494613 KIR2DS5A0A0G2JLQ3 304 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 A0A0G2JNG1 304 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 KIR2DS3K7RE56 304 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 DDX3YO15523 660 aaKnown RBP15.38■□□□□ 0.05
LIMS2-216ENST00000494613 FTCDO95954 541 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 FGF3P11487 239 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-216ENST00000494613 SLC2A4P14672 509 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 XRCC1P18887 633 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-216ENST00000494613 SPAM1P38567 509 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 TMPRSS3P57727 454 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 MSLNQ13421 630 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-216ENST00000494613 OLIG2Q13516 323 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 TRA2AQ13595 282 aaKnown RBP eCLIP15.38■□□□□ 0.05
LIMS2-216ENST00000494613 PRPSAP1Q14558 356 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 KIR2DS5Q14953 304 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 TGIF1Q15583 401 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 FAM151BQ6UXP7 276 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 TXLNBQ8N3L3 684 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 OR10G6Q8NH81 332 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 ZNF398Q8TD17 642 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 NCSTNQ92542 709 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 CCDC74BQ96LY2 380 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 TTC25Q96NG3 672 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 APOL2Q9BQE5 337 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 OSGEPL1Q9H4B0 414 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.38■□□□□ 0.05
LIMS2-216ENST00000494613 ACSL6Q9UKU0 697 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 DNAJC16Q9Y2G8 782 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 KCTD3Q9Y597 815 aa15.38■□□□□ 0.05
LIMS2-216ENST00000494613 IGSF10Q6WRI0 2623 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 PRAMEF33A0A0G2JMD5 474 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 TEX51A0A1B0GUA7 166 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 C5orf60A6NFR6 353 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 PRR19A6NJB7 356 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 MIF4GDA9UHW6 222 aaKnown RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 C9orf172C9J069 976 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 GAPDHSO14556 408 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 HGSO14964 777 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 STX7O15400 261 aaKnown RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 PRAMEF10O60809 474 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 PPFIA2O75334 1257 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 STK10O94804 968 aaKnown RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 LPOP22079 712 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 PSMB4P28070 264 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 CSF2RBP32927 897 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 SLC19A1P41440 591 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 PPM1FP49593 454 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 VAC14Q08AM6 782 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 TAF1AQ15573 450 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 INSCQ1MX18 579 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 WDR74Q6RFH5 385 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 ABRAXAS1Q6UWZ7 409 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 C11orf96Q7Z7L8 435 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 ZFAND4Q86XD8 727 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 RNF10Q8N5U6 811 aaKnown RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 TTC13Q8NBP0 860 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 SPATA13Q96N96 652 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 UBL7Q96S82 380 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 B3GNT4Q9C0J1 378 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 WDR70Q9NW82 654 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 ZNF624Q9P2J8 865 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-216ENST00000494613 ARL5AQ9Y689 179 aa15.37■□□□□ 0.05
LIMS2-216ENST00000494613 GLYATL1P3A0A0U1RQE8 302 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 GOLGA6L9A6NEM1 432 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 C2orf81A6NN90 581 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 A8MU76 341 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 POP7O75817 140 aaKnown RBP15.36■□□□□ 0.05
LIMS2-216ENST00000494613 PTMAP06454 111 aaKnown RBP15.36■□□□□ 0.05
LIMS2-216ENST00000494613 IDSP22304 550 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 RPL10P27635 214 aaKnown RBP15.36■□□□□ 0.05
LIMS2-216ENST00000494613 CSTF2P33240 577 aaKnown RBP eCLIP15.36■□□□□ 0.05
LIMS2-216ENST00000494613 SPARCL1Q14515 664 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 PLA2G4EQ3MJ16 856 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 LDLRAP1Q5SW96 308 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 DENND5AQ6IQ26 1287 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 TMEM220Q6QAJ8 160 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 RASGEF1AQ8N9B8 481 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 FAM71DQ8N9W8 422 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 AGBL5Q8NDL9 886 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 OR4K2Q8NGD2 314 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 SNRNP27Q8WVK2 155 aaKnown RBP15.36■□□□□ 0.05
LIMS2-216ENST00000494613 HES6Q96HZ4 224 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 TAAR9Q96RI9 348 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 CCNL2Q96S94 520 aaPredicted RBP15.36■□□□□ 0.05
LIMS2-216ENST00000494613 TIMM29Q9BSF4 260 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 TBC1D10AQ9BXI6 508 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 STN1Q9H668 368 aaKnown RBP15.36■□□□□ 0.05
LIMS2-216ENST00000494613 ARNT2Q9HBZ2 717 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 OCIAD1Q9NX40 245 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 FOXJ2Q9P0K8 574 aa15.36■□□□□ 0.05
LIMS2-216ENST00000494613 PTPRQQ9UMZ3 2332 aa15.35■□□□□ 0.05
LIMS2-216ENST00000494613 TCRBV7S2A1N4TA0A589 114 aa15.35■□□□□ 0.05
LIMS2-216ENST00000494613 K7ENP7 123 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms