RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 FAR2Q96K12 515 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 MEAF6Q9HAF1 191 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 DZANK1Q9NVP4 752 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 ELOVL2Q9NXB9 296 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 IL36AQ9UHA7 158 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 PLA2G4CQ9UP65 541 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 TRAF6Q9Y4K3 522 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 TRPC5OSA6NMA1 111 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 SYCE1LA8MT33 242 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 NFATC1O95644 943 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 ITGB6P18564 788 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 CPOXP36551 454 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 B4GALNT1Q00973 533 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 KLF10Q13118 480 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 RAB44Q7Z6P3 723 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-225ENST00000494465 CDCA3Q99618 268 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-225ENST00000494465 C1QTNF3Q9BXJ4 246 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 C1orf21Q9H246 121 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 IGFLR1Q9H665 355 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 HPS4Q9NQG7 708 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.35■□□□□ 0.212e-7■■□□□ 13
ATG4B-225ENST00000494465 GDE1Q9NZC3 331 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 FIS1Q9Y3D6 152 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 SKAP2O75563 359 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-225ENST00000494465 SLC25A14O95258 325 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-225ENST00000494465 RPS17P08708 135 aaKnown RBP16.34■□□□□ 0.21
ATG4B-225ENST00000494465 EEF1DP29692 281 aaKnown RBP16.34■□□□□ 0.21
ATG4B-225ENST00000494465 INHBCP55103 352 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 SATB1Q01826 763 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 UGT3A2Q3SY77 523 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 FBXO48Q5FWF7 155 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 GPRC6AQ5T6X5 926 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 CLEC6AQ6EIG7 209 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 CPSF7Q8N684 471 aaKnown RBP16.34■□□□□ 0.21
ATG4B-225ENST00000494465 PCDH12Q9NPG4 1184 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 ZDHHC3Q9NYG2 299 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 IGLV3-16A0A075B6K0 115 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-225ENST00000494465 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-225ENST00000494465 XIRP2A4UGR9 3374 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 UPK3BL1B0FP48 263 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 UPK3BL2E5RIL1 263 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 STX16-NPEPL1H3BU86 382 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 STX16O14662 325 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 VIPR1P32241 457 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 AGTR2P50052 363 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 SNCBQ16143 134 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 ZNF805Q5CZA5 627 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 ZDHHC20Q5W0Z9 365 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 SBSNQ6UWP8 590 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 HSD11B1LQ7Z5J1 315 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 GPSM1Q86YR5 675 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 OBP2AQ9NY56 170 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 DKK3Q9UBP4 350 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 BAIAP2L1Q9UHR4 511 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 SLC8A2Q9UPR5 921 aa16.34■□□□□ 0.21
ATG4B-225ENST00000494465 A0A1B0GTL3 188 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 NCF1BA6NI72 391 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-225ENST00000494465 NCF1CA8MVU1 366 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-225ENST00000494465 LINC01565O15544 149 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 FGF4P08620 206 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 NCF1P14598 390 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-225ENST00000494465 ZNF30P17039 623 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 PRDX6P30041 224 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 NSG1P42857 185 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 RALGDSQ12967 914 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 TANGO2Q6ICL3 276 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 SYCE2Q6PIF2 218 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 SFTPA1Q8IWL2 248 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 PELI3Q8N2H9 469 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 LRIG1Q96JA1 1093 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 ASB2Q96Q27 587 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 MMADHCQ9H3L0 296 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-225ENST00000494465 CD84Q9UIB8 345 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 MEI4A8MW99 385 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 TRIM16O95361 564 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 CYP2A6P11509 494 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-225ENST00000494465 GM2AP17900 193 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 COPAP53621 1224 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 CLCQ05315 142 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 ARHGEF7Q14155 803 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 TGFBIQ15582 683 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 NAIF1Q69YI7 327 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-225ENST00000494465 VITQ6UXI7 678 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 TMEM184AQ6ZMB5 413 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 ACTRT2Q8TDY3 377 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 CMTM5Q96DZ9 223 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 CATSPER2Q96P56 530 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 LENG8Q96PV6 779 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-225ENST00000494465 ABCG8Q9H221 673 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 DENND2DQ9H6A0 471 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-225ENST00000494465 ZBTB26Q9HCK0 441 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 LATS2Q9NRM7 1088 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 MBD1Q9UIS9 605 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-225ENST00000494465 MSRAQ9UJ68 235 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 ASB1Q9Y576 335 aa16.33■□□□□ 0.2
ATG4B-225ENST00000494465 FOXA1P55317 472 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 PPP1R3AQ16821 1122 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 ACSBG2Q5FVE4 666 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 NXNQ6DKJ4 435 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms