RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 KLHL3Q9UH77 587 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 DNAJC16Q9Y2G8 782 aa23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 HELZ2Q9BYK8 2649 aaKnown RBP23.34■■□□□ 1.33
RHBDD3-206ENST00000493894 B8ZZF3 427 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 F5H423 210 aaPredicted RBP23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 VIPP01282 170 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 EPOP01588 193 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 XRCC1P18887 633 aaPredicted RBP23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 WT1P19544 449 aaPredicted RBP23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 MARCKSL1P49006 195 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 GTF2H3Q13889 308 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 NOMO1Q15155 1222 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 SEPT7Q16181 437 aaKnown RBP23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 ZDHHC20Q5W0Z9 365 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 XKR5Q6UX68 686 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 PID1Q7Z2X4 250 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 CCDC170Q8IYT3 715 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 ZNF567Q8N184 647 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 FCRL5Q96RD9 977 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 UCK1Q9HA47 277 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 SLC23A2Q9UGH3 650 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 PCDHA13Q9Y5I0 950 aa23.33■■□□□ 1.33
RHBDD3-206ENST00000493894 MN1Q10571 1320 aaPredicted RBP23.33■■□□□ 1.32
RHBDD3-206ENST00000493894 HACD1B0YJ81 288 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 VCLP18206 1134 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 CYLC1P35663 651 aaPredicted RBP23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 CHRNA4P43681 627 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 MPP3Q13368 585 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 PPP2R5EQ16537 467 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 LINC00303Q3SY05 128 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 ATP13A5Q4VNC0 1218 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 KHDC1Q4VXA5 237 aaKnown RBP23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 SIRPB2Q5JXA9 342 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 GLT6D1Q7Z4J2 308 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 DAAM2Q86T65 1068 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 PLXDC1Q8IUK5 500 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 TRAPPC5Q8IUR0 188 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 ZNF547Q8IVP9 402 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 CACNA2D3Q8IZS8 1091 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 TTC30BQ8N4P2 665 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 SLC25A41Q8N5S1 370 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 IPMKQ8NFU5 416 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 OXNAD1Q96HP4 312 aaPredicted RBP23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 MRGPRX2Q96LB1 330 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 FSD1LQ9BXM9 530 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 POT1Q9NUX5 634 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 SCHIP1Q9P0W5 487 aaPredicted RBP23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 RSPH14Q9UHP6 348 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 TFR2Q9UP52 801 aa23.32■■□□□ 1.32
RHBDD3-206ENST00000493894 RAD1O60671 282 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 HLA-DPA1P20036 260 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 SPAM1P38567 509 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 MC2RQ01718 297 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 SLC1A5Q15758 541 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 CEACAM20Q6UY09 585 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 TMEM26Q6ZUK4 368 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 BBS12Q6ZW61 710 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 EXD3Q8N9H8 876 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 BLOC1S5Q8TDH9 187 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 RTP4Q96DX8 246 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 TTC25Q96NG3 672 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 ZPBPQ9BS86 351 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 ZCCHC2Q9C0B9 1178 aaKnown RBP23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 IL26Q9NPH9 171 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 TRHDEQ9UKU6 1024 aa23.31■■□□□ 1.32
RHBDD3-206ENST00000493894 PRR19A6NJB7 356 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 J3QKU1 62 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 APOC4-APOC2K7ER74 178 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 APOC2P02655 101 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 ANKRD34CP0C6C1 535 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 IDSP22304 550 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 CYP4F2P78329 520 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 TMEM115Q12893 351 aaPredicted RBP23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 CCDC181Q5TID7 509 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 DTX3LQ8TDB6 740 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 BRSK1Q8TDC3 778 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 KRT35Q92764 455 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 CTRCQ99895 268 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 ZNF624Q9P2J8 865 aaPredicted RBP23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 TMPRSS11EQ9UL52 423 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 PKP3Q9Y446 797 aa23.3■■□□□ 1.32
RHBDD3-206ENST00000493894 UBXN7O94888 489 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 LIFP15018 202 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 RPL10P27635 214 aaKnown RBP23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 SLC19A1P41440 591 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 GFERP55789 205 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 XRCC4Q13426 336 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 TBR1Q16650 682 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 AGAP9Q5VTM2 703 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 ABRAXAS1Q6UWZ7 409 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 WASH2PQ6VEQ5 465 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 RBM12BQ8IXT5 1001 aaKnown RBP23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 CXorf40BQ96DE9 158 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 FERMT1Q9BQL6 677 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 HEMGNQ9BXL5 484 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 WASH6PQ9NQA3 447 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 FBXO8Q9NRD0 319 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 IL17CQ9P0M4 197 aa23.29■■□□□ 1.32
RHBDD3-206ENST00000493894 PILRAQ9UKJ1 303 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms