RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CLEC3BP05452 202 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 CTAGE8P0CG41 777 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 CSF2RAP15509 400 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 GNAZP19086 355 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 PSMA4P25789 261 aaKnown RBP3.81□□□□□ -1.8
SMC4-223ENST00000493695 CPOXP36551 454 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 CCR9P51686 369 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 TSTQ16762 297 aaKnown RBP3.81□□□□□ -1.8
SMC4-223ENST00000493695 UGP2Q16851 508 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 ZNF280DQ6N043 979 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 FAAP20Q6NZ36 180 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 BRAT1Q6PJG6 821 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 RSRC2Q7L4I2 434 aaKnown RBP3.81□□□□□ -1.8
SMC4-223ENST00000493695 MAATS1Q7Z4T9 603 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 TBC1D1Q86TI0 1168 aaPredicted RBP3.81□□□□□ -1.8
SMC4-223ENST00000493695 HAPLN4Q86UW8 402 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 CTAGE4Q8IX94 777 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 METTL6Q8TCB7 284 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 IFIH1Q9BYX4 1025 aaKnown RBP3.81□□□□□ -1.8
SMC4-223ENST00000493695 TKTL2Q9H0I9 626 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 SLC25A18Q9H1K4 315 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 SEBOXQ9HB31 216 aaPredicted RBP3.81□□□□□ -1.8
SMC4-223ENST00000493695 VEZTQ9HBM0 779 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 FBXL2Q9UKC9 423 aa3.81□□□□□ -1.8
SMC4-223ENST00000493695 TCERG1O14776 1098 aaKnown RBP3.8□□□□□ -1.8
SMC4-223ENST00000493695 HS3ST1O14792 307 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 USO1O60763 962 aaKnown RBP3.8□□□□□ -1.8
SMC4-223ENST00000493695 ICAM3P32942 547 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 MAN1A1P33908 653 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 RGS2P41220 211 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 GABRB2P47870 512 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 ARCN1P48444 511 aaKnown RBP3.8□□□□□ -1.8
SMC4-223ENST00000493695 MLLT10P55197 1068 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 SLC8A3P57103 927 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 DCAF7P61962 342 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 ACVR2BQ13705 512 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 RNPS1Q15287 305 aaKnown RBP3.8□□□□□ -1.8
SMC4-223ENST00000493695 RALBP1Q15311 655 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 HYIQ5T013 277 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 FAM180BQ6P0A1 224 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 METTL7BQ6UX53 244 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 ANO5Q75V66 913 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 RRM2BQ7LG56 351 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 PIWIL4Q7Z3Z4 852 aaKnown RBP3.8□□□□□ -1.8
SMC4-223ENST00000493695 KLHL29Q96CT2 875 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 C18orf12Q96KH6 178 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 KLHL15Q96M94 604 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 ZHX3Q9H4I2 956 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 CCDC177Q9NQR7 707 aaPredicted RBP3.8□□□□□ -1.8
SMC4-223ENST00000493695 TCP11L1Q9NUJ3 509 aa3.8□□□□□ -1.8
SMC4-223ENST00000493695 KIAA1210Q9ULL0 1709 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 STK36Q9NRP7 1315 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 TEX13CA0A0J9YWL9 993 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 IFNL4K9M1U5 179 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 PLOD2O00469 737 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 SEC14L5O43304 696 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 HOXB5P09067 269 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 ZNF23P17027 643 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 BSGP35613 385 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 EIF5P55010 431 aaKnown RBP3.79□□□□□ -1.8
SMC4-223ENST00000493695 EIF3BP55884 814 aaKnown RBP3.79□□□□□ -1.8
SMC4-223ENST00000493695 GEMIN4P57678 1058 aaKnown RBP3.79□□□□□ -1.8
SMC4-223ENST00000493695 KRTAP12-2P59991 146 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 RPL7AP62424 266 aaKnown RBP3.79□□□□□ -1.8
SMC4-223ENST00000493695 KCNJ10P78508 379 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 SPOCK1Q08629 439 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 ASPRV1Q53RT3 343 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 DCST1Q5T197 706 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 DIS3L2Q8IYB7 885 aaKnown RBP3.79□□□□□ -1.8
SMC4-223ENST00000493695 GRHL3Q8TE85 626 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 SAAL1Q96ER3 474 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 OXNAD1Q96HP4 312 aaPredicted RBP3.79□□□□□ -1.8
SMC4-223ENST00000493695 STRA6Q9BX79 667 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 RANBP17Q9H2T7 1088 aaKnown RBP3.79□□□□□ -1.8
SMC4-223ENST00000493695 TRPC7Q9HCX4 862 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 OLA1Q9NTK5 396 aaKnown RBP3.79□□□□□ -1.8
SMC4-223ENST00000493695 AASSQ9UDR5 926 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 INTS6Q9UL03 887 aaKnown RBP3.79□□□□□ -1.8
SMC4-223ENST00000493695 PNMA2Q9UL42 364 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 PADI3Q9ULW8 664 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 A4GNTQ9UNA3 340 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 CAMK2AQ9UQM7 478 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 SCINQ9Y6U3 715 aa3.79□□□□□ -1.8
SMC4-223ENST00000493695 ZNF318Q5VUA4 2279 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 A0A087X002 238 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 A0A1W2PQF6 199 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 PGPEP1LA6NFU8 196 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 VCYO14598 125 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 DCXO43602 365 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 SEC14L2O76054 403 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 KRT19P08727 400 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 LAMP2P13473 410 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 MBTD1Q05BQ5 628 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 TUBB2AQ13885 445 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 FRG2Q64ET8 278 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 BEST3Q8N1M1 668 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 SLC44A1Q8WWI5 657 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 RHBDF1Q96CC6 855 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 PERPQ96FX8 193 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms