RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ZNF197O14709 1029 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 GIPC1O14908 333 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 RB1P06400 928 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 SNRPB2P08579 225 aaKnown RBP10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 UROSP10746 265 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 STK19P49842 368 aaPredicted RBP10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 CCNHP51946 323 aaPredicted RBP10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 POLR2LP62875 67 aaKnown RBP10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 CCNIQ14094 377 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 TGFBIQ15582 683 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 MUM1Q2TAK8 710 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 PIGGQ5H8A4 983 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 OGFOD2Q6N063 350 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 METTL2BQ6P1Q9 378 aaKnown RBP10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 CRTC1Q6UUV9 634 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 ZSWIM9Q86XI8 627 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 HPS6Q86YV9 775 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 DNAJC9Q8WXX5 260 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 RPL10LQ96L21 214 aaKnown RBP10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 NSUN5Q96P11 429 aaKnown RBP10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 ZNF382Q96SR6 550 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 CIPCQ9C0C6 399 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 CD274Q9NZQ7 290 aa10.68□□□□□ -0.7
PHACTR4-204ENST00000493669 NPIPB15A6NHN6 443 aaPredicted RBP10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 EIF3FO00303 357 aaPredicted RBP10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 PIP5K1BO14986 540 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 CRCPO75575 148 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 S100BP04271 92 aaPredicted RBP10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 LBPP18428 481 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 TSPAN8P19075 237 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 ATP6V1C1P21283 382 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 GKP32189 559 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 HK3P52790 923 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 GRIK2Q13002 908 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 GSTA3Q16772 222 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 PPP1R3AQ16821 1122 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 TTLL9Q3SXZ7 439 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 PDE12Q6L8Q7 609 aaKnown RBP10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 FRA10AC1Q70Z53 315 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 UBE2Q1Q7Z7E8 422 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 PHYKPLQ8IUZ5 450 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 AHI1Q8N157 1196 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 MYO1HQ8N1T3 1032 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 PDPRQ8NCN5 879 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 HMGCLL1Q8TB92 370 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 DTX3LQ8TDB6 740 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 NAF1Q96HR8 494 aaKnown RBP10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 ZNF570Q96NI8 536 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 MTIF3Q9H2K0 278 aaKnown RBP10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 AKTIPQ9H8T0 292 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 SARS2Q9NP81 518 aaKnown RBP10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 TMEM45AQ9NWC5 275 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 NMRK1Q9NWW6 199 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 A0A0U1RQS6 177 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 LRRC14BA6NHZ5 514 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 RAD51BO15315 384 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 MAP3K7O43318 606 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 RFPL2O75678 378 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 CBSLP0DN79 551 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 HSPA8P11142 646 aaKnown RBP10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 TYRP14679 529 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 NFKBIAP25963 317 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 CBSP35520 551 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 NSG1P42857 185 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 SESN3P58005 492 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 CHRNA6Q15825 494 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 AGKQ53H12 422 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 ASTLQ6HA08 431 aaPredicted RBP10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 GK5Q6ZS86 529 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 SPATA19Q7Z5L4 167 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 RIN3Q8TB24 985 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 NRG4Q8WWG1 115 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 ASIC4Q96FT7 647 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 HGH1Q9BTY7 390 aa10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 KIAA0100Q14667 2235 aaKnown RBP10.67□□□□□ -0.7
PHACTR4-204ENST00000493669 LINC01553A4QN01 128 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 E2F3O00716 465 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 MATN4O95460 622 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 ZNF423Q2M1K9 1284 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 LRRC66Q68CR7 880 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 BRAT1Q6PJG6 821 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 DPY19L3Q6ZPD9 716 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 ZBTB2Q8N680 514 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 MICAL1Q8TDZ2 1067 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 TSPEARQ8WU66 669 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 CCDC124Q96CT7 223 aaKnown RBP10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 C3orf30Q96M34 536 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 CDRT15Q96T59 188 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 FAM126AQ9BYI3 521 aaPredicted RBP10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 SEMA4BQ9NPR2 832 aaPredicted RBP10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 SPATS2LQ9NUQ6 558 aaKnown RBP10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 ZDHHC3Q9NYG2 299 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 OARD1Q9Y530 152 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 WASF2Q9Y6W5 498 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 GPR39O43194 453 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 PRR35P0CG20 571 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 ENO3P13929 434 aaPredicted RBP10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 IDO1P14902 403 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 ZNF30P17039 623 aa10.66□□□□□ -0.7
PHACTR4-204ENST00000493669 GPX3P22352 226 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 249.8 ms