RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 SUN1O94901 812 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 CDK14O94921 469 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 FGGP02679 453 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 F3P13726 295 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 STIP1P31948 543 aaKnown RBP13.45□□□□□ -0.26
PDCD11-206ENST00000493610 CCKBRP32239 447 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 RPL22P35268 128 aaKnown RBP13.45□□□□□ -0.26
PDCD11-206ENST00000493610 KCNJ1P48048 391 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 ARSDP51689 593 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 SEMA5AQ13591 1074 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 TBC1D25Q3MII6 688 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 ZNF658BQ4V348 819 aaPredicted RBP13.45□□□□□ -0.26
PDCD11-206ENST00000493610 NKAIN2Q5VXU1 208 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 ZDHHC20Q5W0Z9 365 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 FAM83HQ6ZRV2 1179 aaPredicted RBP13.45□□□□□ -0.26
PDCD11-206ENST00000493610 LRRTM4Q86VH4 590 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 RASGEF1CQ8N431 466 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 OR52K1Q8NGK4 314 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 ZNF398Q8TD17 642 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 LIN37Q96GY3 246 aaPredicted RBP13.45□□□□□ -0.26
PDCD11-206ENST00000493610 CRELD1Q96HD1 420 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 DNAJC1Q96KC8 554 aaKnown RBP13.45□□□□□ -0.26
PDCD11-206ENST00000493610 ALS2CR12Q96Q35 445 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 C19orf43Q9BQ61 176 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 FERMT1Q9BQL6 677 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 TIMM29Q9BSF4 260 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 LRRC40Q9H9A6 602 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 POLR1BQ9H9Y6 1135 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 RDH14Q9HBH5 336 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 TMEM9Q9P0T7 183 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 WDR37Q9Y2I8 494 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 PKP3Q9Y446 797 aa13.45□□□□□ -0.26
PDCD11-206ENST00000493610 H7C0S8 307 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 KMOO15229 486 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 PRAMEF1O95521 474 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 EIF2S3P41091 472 aaKnown RBP13.44□□□□□ -0.26
PDCD11-206ENST00000493610 ETV5P41161 510 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 SLC19A1P41440 591 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 GPR3P46089 330 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 TMPRSS15P98073 1019 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 NFATC2Q13469 925 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 C3orf38Q5JPI3 329 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 TTC27Q6P3X3 843 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 ABRAXAS1Q6UWZ7 409 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 USP53Q70EK8 1073 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 BEND7Q8N7W2 519 aaPredicted RBP13.44□□□□□ -0.26
PDCD11-206ENST00000493610 GRAMD1AQ96CP6 724 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 MS4A14Q96JA4 679 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 SLC46A1Q96NT5 459 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 PPP1R2P1Q96PQ5 205 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 FAM96AQ9H5X1 160 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 SYNDIG1Q9H7V2 258 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 SARS2Q9NP81 518 aaKnown RBP13.44□□□□□ -0.26
PDCD11-206ENST00000493610 CASS4Q9NQ75 786 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 NLE1Q9NVX2 485 aaPredicted RBP13.44□□□□□ -0.26
PDCD11-206ENST00000493610 SMARCAL1Q9NZC9 954 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 OGFRQ9NZT2 677 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 FEZ2Q9UHY8 353 aaPredicted RBP13.44□□□□□ -0.26
PDCD11-206ENST00000493610 ZNF148Q9UQR1 794 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 DRG1Q9Y295 367 aaKnown RBP13.44□□□□□ -0.26
PDCD11-206ENST00000493610 PCDHGA8Q9Y5G5 932 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 AK5Q9Y6K8 562 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 ITPR1Q14643 2758 aa13.44□□□□□ -0.26
PDCD11-206ENST00000493610 IGLV3-16A0A075B6K0 115 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 CCDC187A0A096LP49 1063 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 IGHV5-10-1A0A0J9YXX1 117 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 C2orf81A6NN90 581 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 CEP104O60308 925 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 SNX2O60749 519 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 PTMAP06454 111 aaKnown RBP13.43□□□□□ -0.26
PDCD11-206ENST00000493610 HGFP14210 728 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 ITPKBP27987 946 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 ALDH4A1P30038 563 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 INHBCP55103 352 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 DMPKQ09013 629 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 POU6F1Q14863 301 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 CLCA4Q14CN2 919 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 C16orf72Q14CZ0 275 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 AMZ1Q400G9 498 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 LDLRAP1Q5SW96 308 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 WASH2PQ6VEQ5 465 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 PIANPQ8IYJ0 282 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 SLC35F6Q8N357 371 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 LILRA3Q8N6C8 439 aaPredicted RBP13.43□□□□□ -0.26
PDCD11-206ENST00000493610 COG1Q8WTW3 980 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 CDKN2AIPNLQ96HQ2 116 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 ZNF778Q96MU6 729 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 ASB8Q9H765 288 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 WASH6PQ9NQA3 447 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 PDP2Q9P2J9 529 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 RALYQ9UKM9 306 aaKnown RBP13.43□□□□□ -0.26
PDCD11-206ENST00000493610 DNAJC16Q9Y2G8 782 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 NEU2Q9Y3R4 380 aa13.43□□□□□ -0.26
PDCD11-206ENST00000493610 OR2AG2A6NM03 316 aa13.42□□□□□ -0.26
PDCD11-206ENST00000493610 RHPN2P1A8MT19 583 aa13.42□□□□□ -0.26
PDCD11-206ENST00000493610 FANCGO15287 622 aa13.42□□□□□ -0.26
PDCD11-206ENST00000493610 POP7O75817 140 aaKnown RBP13.42□□□□□ -0.26
PDCD11-206ENST00000493610 CRTAMO95727 393 aa13.42□□□□□ -0.26
PDCD11-206ENST00000493610 CPNE6O95741 557 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms