RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 INCA1Q0VD86 236 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 SMAD4Q13485 552 aaKnown RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 DUSP6Q16828 381 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 LRRC26Q2I0M4 334 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 FLYWCH1Q4VC44 716 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ZBTB37Q5TC79 503 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 PAMR1Q6UXH9 720 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 STRA8Q7Z7C7 330 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 SLC26A11Q86WA9 606 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 NLGN4XQ8N0W4 816 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 OR52H1Q8NGJ2 320 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 FATE1Q969F0 183 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 TMCO6Q96DC7 493 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ASB9Q96DX5 294 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ELMO2Q96JJ3 720 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 STRA6Q9BX79 667 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ERVK-6Q9BXR3 956 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 CATSPERBQ9H7T0 1116 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 IL1RL2Q9HB29 575 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 CACNA2D2Q9NY47 1150 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 MAP10Q9P2G4 905 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ERVK-18Q9QC07 812 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 FBXO5Q9UKT4 447 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 SHOC2Q9UQ13 582 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 PDE10AQ9Y233 779 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 PCDHGB6Q9Y5F9 930 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 CDY1Q9Y6F8 540 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 TP53BP1Q12888 1972 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 CCDC154A6NI56 674 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 USP17L5A8MUK1 530 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 KBTBD13C9JR72 458 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 MEIS2O14770 477 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 TBC1D4O60343 1298 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 PGLSO95336 258 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 LYPLA2O95372 231 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 STAU1O95793 577 aaKnown RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 SERPINE1P05121 402 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 EDN3P14138 238 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 GARSP41250 739 aaKnown RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ELK3P41970 407 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 NSFP46459 744 aaKnown RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 RAP1GAPP47736 663 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 RNF4P78317 190 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 YWHAHQ04917 246 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF543Q08ER8 600 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 FGL2Q14314 439 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 FGFBP1Q14512 234 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 SKIV2LQ15477 1246 aaKnown RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 MAJINQ3KP22 176 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 FCRLBQ6BAA4 426 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 CES3Q6UWW8 571 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 NIPA1Q7RTP0 329 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 SLC16A13Q7RTY0 426 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 FRMD5Q7Z6J6 570 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 DPP9Q86TI2 863 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 LDHDQ86WU2 507 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 PARP16Q8N5Y8 322 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 WDR48Q8TAF3 677 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 PHF10Q8WUB8 498 aaKnown RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 RBPMSQ93062 196 aaKnown RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 PTP4A1Q93096 173 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 PRMT6Q96LA8 375 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 GFM1Q96RP9 751 aaKnown RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 GPR63Q9BZJ6 419 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 TMEM117Q9H0C3 514 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 TTYH1Q9H313 450 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 FAM83DQ9H4H8 585 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ZFP14Q9HCL3 533 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 MAGED1Q9Y5V3 778 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 C2orf74A8MZ97 194 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 WRBO00258 174 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 SLC37A4O43826 429 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 CDK14O94921 469 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 LDOC1O95751 146 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 CYBBP04839 570 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 MYL9P24844 172 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 DDX6P26196 483 aaKnown RBP eCLIP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ATP5OP48047 213 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 POU4F1Q01851 419 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 QPRTQ15274 297 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 SLC9B1Q4ZJI4 515 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 TEX44Q53QW1 395 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 PDSS1Q5T2R2 415 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 N4BP2L1Q5TBK1 243 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 SLC6A19Q695T7 634 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 SLFN12LQ6IEE8 588 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 TIGD7Q6NT04 549 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 PNCKQ6P2M8 343 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 SHQ1Q6PI26 577 aaKnown RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 TXNDC11Q6PKC3 985 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 USP17L2Q6R6M4 530 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 MOXD1Q6UVY6 613 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ZYG11AQ6WRX3 759 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 SSX9Q7RTT3 188 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 THAP5Q7Z6K1 395 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 CDAN1Q8IWY9 1227 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 PACRGLQ8N7B6 248 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 OR4M2Q8NGB6 313 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 OR4M1Q8NGD0 313 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 RAD54LQ92698 747 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms