RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SELPLGQ14242 412 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 PCID2Q5JVF3 399 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 GPR158Q5T848 1215 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 IER5Q5VY09 327 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 NAPEPLDQ6IQ20 393 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 NEK5Q6P3R8 708 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 ENPP6Q6UWR7 440 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 NEK10Q6ZWH5 1172 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 ZDHHC17Q8IUH5 632 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 CNTN4Q8IWV2 1026 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 ANKK1Q8NFD2 765 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 OR6B3Q8NGW1 331 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 FBXO30Q8TB52 745 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 PPM1MQ96MI6 270 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 CENPOQ9BU64 300 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 FAM49AQ9H0Q0 323 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 MUC13Q9H3R2 512 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 PLEKHA5Q9HAU0 1116 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 QPCTLQ9NXS2 382 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 CRNNQ9UBG3 495 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 OSGIN1Q9UJX0 560 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 STAP1Q9ULZ2 295 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 AGAP5A6NIR3 686 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 PPEF2O14830 753 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 MATN4O95460 622 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 NDST3O95803 873 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 RBP1P09455 135 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 NPR1P16066 1061 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 HTR1EP28566 365 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 IL12AP29459 219 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 MATKP42679 507 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 FKBP1AP62942 108 aaKnown RBP11.6□□□□□ -0.55
HDAC4-210ENST00000493582 PPP2R2BQ00005 443 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 FOXM1Q08050 763 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 RAPSNQ13702 412 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 NKG7Q16617 165 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 PLA2G4EQ3MJ16 856 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 FAM98BQ52LJ0 330 aaKnown RBP11.6□□□□□ -0.55
HDAC4-210ENST00000493582 NXNL2Q5VZ03 156 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 SCIMPQ6UWF3 145 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 LDB1Q86U70 411 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-210ENST00000493582 SLC22A9Q8IVM8 553 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 OR52K2Q8NGK3 314 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 TTYH2Q9BSA4 534 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 DCSTAMPQ9H295 470 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 RNF19AQ9NV58 838 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 GPR45Q9Y5Y3 372 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 EFCAB9A8MZ26 197 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 PTTG1O95997 202 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 FMO4P31512 558 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 IFNA8P32881 189 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 ST13P50502 369 aaKnown RBP11.6□□□□□ -0.55
HDAC4-210ENST00000493582 EEFSECP57772 596 aaKnown RBP11.6□□□□□ -0.55
HDAC4-210ENST00000493582 TOP3AQ13472 1001 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-210ENST00000493582 CDK10Q15131 360 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 FSCN1Q16658 493 aaKnown RBP11.6□□□□□ -0.55
HDAC4-210ENST00000493582 SLC25A52Q3SY17 297 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 ZNF404Q494X3 552 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 OTUD1Q5VV17 481 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-210ENST00000493582 SYPL2Q5VXT5 272 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 TMEM207Q6UWW9 146 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 TMEM179BQ7Z7N9 219 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 PROSER1Q86XN7 944 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 GALNT12Q8IXK2 581 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 MICU2Q8IYU8 434 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 CADM2Q8N3J6 435 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 CELF6Q96J87 481 aaKnown RBP11.6□□□□□ -0.55
HDAC4-210ENST00000493582 CXCL16Q9H2A7 254 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 FZD8Q9H461 694 aa11.6□□□□□ -0.55
HDAC4-210ENST00000493582 PAQR5Q9NXK6 330 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-210ENST00000493582 CENPXA8MT69 81 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 AZIN1O14977 448 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 PGLSO95336 258 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 CD4P01730 458 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 DBTP11182 482 aaKnown RBP11.59□□□□□ -0.55
HDAC4-210ENST00000493582 CD36P16671 472 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 OR2B6P58173 313 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 MXD4Q14582 209 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-210ENST00000493582 TMEM132DQ14C87 1099 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 ACOX1Q15067 660 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 SMN1Q16637 294 aaKnown RBP11.59□□□□□ -0.55
HDAC4-210ENST00000493582 SYT16Q17RD7 645 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 ZFP69Q49AA0 526 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 LAIR1Q6GTX8 287 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 CES5AQ6NT32 575 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 GALNT5Q7Z7M9 940 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 ISCA2Q86U28 154 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 ELMOD2Q8IZ81 293 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 PARP16Q8N5Y8 322 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 C2CD4AQ8NCU7 369 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-210ENST00000493582 TEKT5Q96M29 485 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 SNX18Q96RF0 628 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 CITED4Q96RK1 184 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 PCDHGB1Q9Y5G3 927 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 TBKBP1A7MCY6 615 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 I6L893 689 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-210ENST00000493582 MITFO75030 526 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-210ENST00000493582 MT-ND2P03891 347 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 CYP4B1P13584 511 aa11.59□□□□□ -0.55
HDAC4-210ENST00000493582 GGT5P36269 586 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms