RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 IRGCQ6NXR0 463 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 CRTC3Q6UUV7 619 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 FAM92BQ6ZTR7 304 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 LRRTM4Q86VH4 590 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.37■□□□□ 0.37
NUP50-218ENST00000493456 ARRDC2Q8TBH0 407 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 UBXN4Q92575 508 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 MLPHQ9BV36 600 aaPredicted RBP17.37■□□□□ 0.37
NUP50-218ENST00000493456 SPATA16Q9BXB7 569 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 ING2Q9H160 280 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 SLC40A1Q9NP59 571 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 RBM22Q9NW64 420 aaKnown RBP eCLIP17.37■□□□□ 0.37
NUP50-218ENST00000493456 SEMA5BQ9P283 1151 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 ZNF451Q9Y4E5 1061 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 CSMD1Q96PZ7 3565 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 ANKRD66B4E2M5 251 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 TIAF1O95411 115 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 ZNF7P17097 686 aaPredicted RBP17.36■□□□□ 0.37
NUP50-218ENST00000493456 CCNCP24863 283 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 MYL5Q02045 173 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 ACY1Q03154 408 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 GPR18Q14330 331 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 KRT81Q14533 505 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 INPP5JQ15735 1006 aaPredicted RBP17.36■□□□□ 0.37
NUP50-218ENST00000493456 CHRNA6Q15825 494 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 SEPT7Q16181 437 aaKnown RBP17.36■□□□□ 0.37
NUP50-218ENST00000493456 IFI16Q16666 785 aaKnown RBP17.36■□□□□ 0.37
NUP50-218ENST00000493456 QPCTQ16769 361 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 PLA2G4EQ3MJ16 856 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 AGAP9Q5VTM2 703 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 PWWP2BQ6NUJ5 590 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 ABRAXAS1Q6UWZ7 409 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 WASH2PQ6VEQ5 465 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 MAMDC2Q7Z304 686 aaPredicted RBP17.36■□□□□ 0.37
NUP50-218ENST00000493456 ADGRG6Q86SQ4 1221 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 HPS6Q86YV9 775 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 SIDT2Q8NBJ9 832 aaKnown RBP17.36■□□□□ 0.37
NUP50-218ENST00000493456 CXorf40BQ96DE9 158 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 SLC41A2Q96JW4 573 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 ADGRE3Q9BY15 652 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 HAUS4Q9H6D7 363 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 ARFGAP3Q9NP61 516 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 WASH6PQ9NQA3 447 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 RAD18Q9NS91 495 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 NFKBIL1Q9UBC1 381 aaPredicted RBP17.36■□□□□ 0.37
NUP50-218ENST00000493456 MYO1AQ9UBC5 1043 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 SLC23A2Q9UGH3 650 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 DNAJC16Q9Y2G8 782 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 ABCA12Q86UK0 2595 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 TEP1Q99973 2627 aaKnown RBP17.36■□□□□ 0.37
NUP50-218ENST00000493456 SHANK1Q9Y566 2161 aa17.36■□□□□ 0.37
NUP50-218ENST00000493456 TNRC6AQ8NDV7 1962 aaKnown RBP17.35■□□□□ 0.37
NUP50-218ENST00000493456 ESPL1Q14674 2120 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 DPM1O60762 260 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 BRAFP15056 766 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 CDK11BP21127 795 aaKnown RBP17.35■□□□□ 0.37
NUP50-218ENST00000493456 PDE1BQ01064 536 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 SLC25A11Q02978 314 aaKnown RBP17.35■□□□□ 0.37
NUP50-218ENST00000493456 NIPAL4Q0D2K0 466 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 LAMB3Q13751 1172 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 PAFAH1B3Q15102 231 aaKnown RBP17.35■□□□□ 0.37
NUP50-218ENST00000493456 ASIC2Q16515 512 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 CCDC122Q5T0U0 273 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 TXNRD3NBQ6F5E7 133 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 TRAM1L1Q8N609 369 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 NIPA2Q8N8Q9 360 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 GLYATL1Q969I3 302 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 TSGA13Q96PP4 275 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 ZFYVE1Q9HBF4 777 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 CASS4Q9NQ75 786 aa17.35■□□□□ 0.37
NUP50-218ENST00000493456 G3BP2Q9UN86 482 aaKnown RBP17.35■□□□□ 0.37
NUP50-218ENST00000493456 ARGFXA6NJG6 315 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 LRRC53A6NM62 1247 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 OR52A4PA6NMU1 304 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 TCP11X1B4DZS4 312 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 VEGFDO43915 354 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 CPNE3O75131 537 aaKnown RBP17.34■□□□□ 0.37
NUP50-218ENST00000493456 HLA-DQB2P05538 268 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 FOLR1P15328 257 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 VCLP18206 1134 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 LPOP22079 712 aaPredicted RBP17.34■□□□□ 0.37
NUP50-218ENST00000493456 IDSP22304 550 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 IL4RP24394 825 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 RPL10P27635 214 aaKnown RBP17.34■□□□□ 0.37
NUP50-218ENST00000493456 CCL11P51671 97 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 RPS18P62269 152 aaKnown RBP17.34■□□□□ 0.37
NUP50-218ENST00000493456 CHAF1BQ13112 559 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 IL10RAQ13651 578 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 ZNF648Q5T619 568 aaPredicted RBP17.34■□□□□ 0.37
NUP50-218ENST00000493456 NCBP2-AS2Q69YL0 99 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 JMJD6Q6NYC1 403 aaPredicted RBP17.34■□□□□ 0.37
NUP50-218ENST00000493456 KLHL35Q6PF15 583 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 APTXQ7Z2E3 356 aaKnown RBP17.34■□□□□ 0.37
NUP50-218ENST00000493456 ZNF571Q7Z3V5 609 aaPredicted RBP17.34■□□□□ 0.37
NUP50-218ENST00000493456 KMT5CQ86Y97 462 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 FAM71BQ8TC56 605 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 ZNF514Q96K75 400 aaPredicted RBP17.34■□□□□ 0.37
NUP50-218ENST00000493456 RUFY1Q96T51 708 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 SLAMF7Q9NQ25 335 aa17.34■□□□□ 0.37
NUP50-218ENST00000493456 IGHV5-51A0A0C4DH38 117 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms