RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 PCED1BQ96HM7 432 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 TBATAQ96M53 351 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 WDR55Q9H6Y2 383 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-206ENST00000493232 JAM2P57087 298 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 GAD2Q05329 585 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 SRSF11Q05519 484 aaKnown RBP16.18■□□□□ 0.18
BRAT1-206ENST00000493232 ZNF155Q12901 538 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-206ENST00000493232 EML3Q32P44 896 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 KCTD21Q4G0X4 260 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 SNAP47Q5SQN1 464 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 ATXN7L2Q5T6C5 722 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-206ENST00000493232 HGSNATQ68CP4 663 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 OR2T34Q8NGX1 318 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 OR2T3Q8NH03 318 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 CDADC1Q9BWV3 514 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 CALML5Q9NZT1 146 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 ANXA4P09525 319 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-206ENST00000493232 BCAP31P51572 246 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 ARFIP1P53367 373 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 LILRA4P59901 499 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 LSM3P62310 102 aaKnown RBP16.18■□□□□ 0.18
BRAT1-206ENST00000493232 CDH24Q86UP0 819 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 NARS2Q96I59 477 aaKnown RBP16.18■□□□□ 0.18
BRAT1-206ENST00000493232 IFT80Q9P2H3 777 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-206ENST00000493232 ESR1P03372 595 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 PCCBP05166 539 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 POU5F1Q01860 360 aaKnown RBP16.18■□□□□ 0.18
BRAT1-206ENST00000493232 CLCQ05315 142 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 HKDC1Q2TB90 917 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 TTC29Q8NA56 475 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-206ENST00000493232 RIPOR3Q96MK2 946 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 COQ7Q99807 217 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 EIF2B3Q9NR50 452 aaKnown RBP16.18■□□□□ 0.18
BRAT1-206ENST00000493232 ABCB10Q9NRK6 738 aa16.18■□□□□ 0.18
BRAT1-206ENST00000493232 RBM7Q9Y580 266 aaKnown RBP16.18■□□□□ 0.18
BRAT1-206ENST00000493232 XKRYO14609 159 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 C8GP07360 202 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 FAUP35544 74 aaKnown RBP16.17■□□□□ 0.18
BRAT1-206ENST00000493232 ZNF846Q147U1 533 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 VARS2Q5ST30 1063 aaKnown RBP16.17■□□□□ 0.18
BRAT1-206ENST00000493232 AHI1Q8N157 1196 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 ZNF567Q8N184 647 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 LRRC17Q8N6Y2 441 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 RBM4BQ9BQ04 359 aaKnown RBP16.17■□□□□ 0.18
BRAT1-206ENST00000493232 RBM4Q9BWF3 364 aaKnown RBP16.17■□□□□ 0.18
BRAT1-206ENST00000493232 FGFBP2Q9BYJ0 223 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 KCNN2Q9H2S1 579 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 NOL11Q9H8H0 719 aaKnown RBP16.17■□□□□ 0.18
BRAT1-206ENST00000493232 CKLFQ9UBR5 152 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 AK5Q9Y6K8 562 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 ELOVL7A1L3X0 281 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 WNT7AO00755 349 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 PGM3O95394 542 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 SLC35G6P0C7Q6 338 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 PRDX6P30041 224 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 DAOAP59103 153 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 VANGL1Q8TAA9 524 aaPredicted RBP16.17■□□□□ 0.18
BRAT1-206ENST00000493232 XAGE5Q8WWM1 108 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 EQTNQ9NQ60 294 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 PLK4O00444 970 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 KERAO60938 352 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 SMPD1P17405 629 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 NT5EP21589 574 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 PTGER3P43115 390 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 EVX2Q03828 476 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.17■□□□□ 0.18
BRAT1-206ENST00000493232 UBR7Q8N806 425 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 CD99L2Q8TCZ2 262 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 HMCESQ96FZ2 354 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 ARL8BQ9NVJ2 186 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 RASGRP1O95267 797 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 FABP3P05413 133 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 PRPS2P11908 318 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 GTF2H2Q13888 395 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 VPS26BQ4G0F5 336 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 GTF2H2CQ6P1K8 395 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 FBXO42Q6P3S6 717 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 IQCKQ8N0W5 287 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 NDRG1Q92597 394 aaKnown RBP16.17■□□□□ 0.18
BRAT1-206ENST00000493232 DNASE1L2Q92874 299 aa16.17■□□□□ 0.18
BRAT1-206ENST00000493232 FUBP3Q96I24 572 aaKnown RBP eCLIP16.17■□□□□ 0.18
BRAT1-206ENST00000493232 IFNW1P05000 195 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 CYP4B1P13584 511 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 MAPK12P53778 367 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 IL23RQ5VWK5 629 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 LINGO4Q6UY18 593 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 MCEMP1Q8IX19 187 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 SLC34A3Q8N130 599 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 C11orf65Q8NCR3 313 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 PSMA8Q8TAA3 256 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 GPR107Q5VW38 600 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 ATCAYQ86WG3 371 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 PGAM4Q8N0Y7 254 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 GSTCDQ8NEC7 633 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 OR7D4Q8NG98 312 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 NEK7Q8TDX7 302 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 PPM1MQ96MI6 270 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 TNKS2Q9H2K2 1166 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 CPQQ9Y646 472 aa16.16■□□□□ 0.18
BRAT1-206ENST00000493232 C2CD4BA6NLJ0 364 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms