RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 IKZF3Q9UKT9 509 aa9.05□□□□□ -0.96
SMARCC1-208ENST00000492896 TRIM33Q9UPN9 1127 aa9.05□□□□□ -0.96
SMARCC1-208ENST00000492896 PRSS21Q9Y6M0 314 aa9.05□□□□□ -0.96
SMARCC1-208ENST00000492896 IGLV3-16A0A075B6K0 115 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 RGSL1A5PLK6 1076 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 TBC1D3BA6NDS4 549 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 TRPC5OSA6NMA1 111 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 CAPN14A8MX76 684 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 STX16-NPEPL1H3BU86 382 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 PSMD11O00231 422 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 NEMP1O14524 444 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 STX16O14662 325 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 MAGEC1O60732 1142 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 SNX2O60749 519 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 TBX10O75333 385 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 SLC25A14O95258 325 aaPredicted RBP9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 TRIM16O95361 564 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 S100BP04271 92 aaPredicted RBP9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ENO1P06733 434 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ELFN1P0C7U0 828 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ESRRAP11474 423 aaPredicted RBP9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 HLA-EP13747 358 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 MTHFD2P13995 350 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 HNRNPLP14866 589 aaKnown RBP eCLIP9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 PSMC3P17980 439 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 DGKAP23743 735 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ITGB7P26010 798 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 PTPN4P29074 926 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 EEF1DP29692 281 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 AKT1P31749 480 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 BMP8BP34820 402 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 MTHFRP42898 656 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 KCNJ2P63252 427 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 SATB1Q01826 763 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 MESP2Q0VG99 397 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ADAM15Q13444 863 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 UBAP2LQ14157 1087 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ELAVL3Q14576 367 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ZNF234Q14588 700 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 CRY1Q16526 586 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 PFKFB4Q16877 469 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ZNF284Q2VY69 593 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 POM121L1PQ3SYA9 428 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 SLC9B1Q4ZJI4 515 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 METTL21CQ5VZV1 264 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 SERPINA13PQ6UXR4 307 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 FRA10AC1Q70Z53 315 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 HSD11B1LQ7Z5J1 315 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 GPSM1Q86YR5 675 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 TREML1Q86YW5 311 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 TRAM1L1Q8N609 369 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ZBTB2Q8N680 514 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 TMIEQ8NEW7 156 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 PIP4K2CQ8TBX8 421 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 DTX3LQ8TDB6 740 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 EEF1AKMT1Q8WVE0 214 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ARRDC3Q96B67 414 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 SLC7A6OSQ96CW6 309 aaPredicted RBP9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 PDLIM5Q96HC4 596 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 PPP1R16AQ96I34 528 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 SPATA16Q9BXB7 569 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 NUF2Q9BZD4 464 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 PLA2G2FQ9BZM2 168 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ZMYND15Q9H091 742 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 RASSF4Q9H2L5 321 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 FAM83DQ9H4H8 585 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ARHGEF3Q9NR81 526 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 SPATS2LQ9NUQ6 558 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 KCTD5Q9NXV2 234 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 KLHL42Q9P2K6 505 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 TAGLN3Q9UI15 199 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 CD84Q9UIB8 345 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 COL4A2P08572 1712 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 CHD9Q3L8U1 2897 aa9.04□□□□□ -0.96
SMARCC1-208ENST00000492896 ZFC3H1O60293 1989 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 CEP290O15078 2479 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 PRR5-ARHGAP8B1AHC4 643 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 TMEM233B4DJY2 109 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 CFAP99D6REC4 459 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 E9PBE3 544 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 C1QTNF3-AMACRE9PGA6 284 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 SPECC1L-ADORA2AF8WAN1 911 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 RAD51BO15315 384 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 KLK8O60259 260 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 KLHL41O60662 606 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 SKAP2O75563 359 aaPredicted RBP9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 KAT7O95251 611 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 SIX3O95343 332 aaPredicted RBP9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 APODP05090 189 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 RPS17P08708 135 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 OR56A5P0C7T3 313 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 LAMP2P13473 410 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 AOC1P19801 751 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 NCF2P19878 526 aaPredicted RBP9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 GDI1P31150 447 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 INHBCP55103 352 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 ARHGAP8P85298 464 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 ELP6Q0PNE2 266 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 ITPRIPL2Q3MIP1 535 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 ACSBG2Q5FVE4 666 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms