RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 EXD3Q8N9H8 876 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 NLGN4YQ8NFZ3 816 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-205ENST00000492851 GDAP1Q8TB36 358 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 EXTL1Q92935 676 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 RTP4Q96DX8 246 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 RBM41Q96IZ5 413 aaKnown RBP12.28□□□□□ -0.44
COL6A1-205ENST00000492851 FCRL5Q96RD9 977 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 POT1Q9NUX5 634 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 TMEM9Q9P0T7 183 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 KLHL8Q9P2G9 620 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-205ENST00000492851 PILRAQ9UKJ1 303 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 PKP3Q9Y446 797 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 PCYT1BQ9Y5K3 369 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-205ENST00000492851 DNMT3AQ9Y6K1 912 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-205ENST00000492851 KLHL33A6NCF5 533 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 ZNF891A8MT65 544 aaPredicted RBP12.27□□□□□ -0.45
COL6A1-205ENST00000492851 PDZK1P1A8MUH7 402 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 UBXN7O94888 489 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 LCA5LO95447 670 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 SLC4A1P02730 911 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 HLA-DPA1P20036 260 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 MAPK9P45984 424 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 ARSDP51689 593 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 WNT3AP56704 352 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 COPS2P61201 443 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 ABHD18Q0P651 414 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 TBX2Q13207 712 aaPredicted RBP12.27□□□□□ -0.45
COL6A1-205ENST00000492851 MPP3Q13368 585 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 ITGA9Q13797 1035 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 MAP7Q14244 749 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 IL11RAQ14626 422 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 LDLRAP1Q5SW96 308 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 KLHL35Q6PF15 583 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 BEND7Q8N7W2 519 aaPredicted RBP12.27□□□□□ -0.45
COL6A1-205ENST00000492851 HTR3CQ8WXA8 447 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 JPH3Q8WXH2 748 aaPredicted RBP12.27□□□□□ -0.45
COL6A1-205ENST00000492851 ZDHHC12Q96GR4 267 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 ZNF514Q96K75 400 aaPredicted RBP12.27□□□□□ -0.45
COL6A1-205ENST00000492851 PPP1R2P1Q96PQ5 205 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 SLC12A9Q9BXP2 914 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 STARD5Q9NSY2 213 aa12.27□□□□□ -0.45
COL6A1-205ENST00000492851 GEMIN8Q9NWZ8 242 aaKnown RBP12.27□□□□□ -0.45
COL6A1-205ENST00000492851 CFAP46Q8IYW2 2715 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 SLC28A2O43868 658 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 IPO7O95373 1038 aaKnown RBP12.26□□□□□ -0.45
COL6A1-205ENST00000492851 C9P02748 559 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 NFKB1P19838 968 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 CYLC1P35663 651 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-205ENST00000492851 SPAM1P38567 509 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 CETN2P41208 172 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 SLC19A1P41440 591 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 CCR10P46092 362 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 KCNC4Q03721 635 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 WASHC5Q12768 1159 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 NFATC3Q12968 1075 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 SRSF6Q13247 344 aaKnown RBP12.26□□□□□ -0.45
COL6A1-205ENST00000492851 PPP2R5EQ16537 467 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 ATP13A5Q4VNC0 1218 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 CRTC2Q53ET0 693 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-205ENST00000492851 SIRPB2Q5JXA9 342 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 KAZNQ674X7 775 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 SARM1Q6SZW1 724 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 CRTC3Q6UUV7 619 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 ZC3H18Q86VM9 953 aaKnown RBP12.26□□□□□ -0.45
COL6A1-205ENST00000492851 AMZ2Q86W34 360 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 CCDC50Q8IVM0 306 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 RNF214Q8ND24 703 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 LRRC45Q96CN5 670 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 CXorf40BQ96DE9 158 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 SLC45A3Q96JT2 553 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 C9orf72Q96LT7 481 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 TBC1D10AQ9BXI6 508 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 FSD1LQ9BXM9 530 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 SPRY4Q9C004 299 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 TRIM5Q9C035 493 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 RAB33BQ9H082 229 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 GPN2Q9H9Y4 310 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-205ENST00000492851 SLC40A1Q9NP59 571 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 ARFGAP3Q9NP61 516 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 IL26Q9NPH9 171 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 UBP1Q9NZI7 540 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 SAE1Q9UBE0 346 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-205ENST00000492851 SLC23A2Q9UGH3 650 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 TUBD1Q9UJT1 453 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 EFR3BQ9Y2G0 817 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 DNAJC16Q9Y2G8 782 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 AAR2Q9Y312 384 aaKnown RBP12.26□□□□□ -0.45
COL6A1-205ENST00000492851 HYOU1Q9Y4L1 999 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 TMEM184BQ9Y519 407 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-205ENST00000492851 PCDHA13Q9Y5I0 950 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 MN1Q10571 1320 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-205ENST00000492851 UNC13CQ8NB66 2214 aa12.26□□□□□ -0.45
COL6A1-205ENST00000492851 hCG_1818297A0A087WSY0 165 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 GLYATL1P3A0A0U1RQE8 302 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 AURKAO14965 403 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 ANXA9O76027 345 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 STK17BO94768 372 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 PYGMP11217 842 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 LIFP15018 202 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 CD68P34810 354 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms