RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CNDP2Q96KP4 475 aaKnown RBP11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 CACYBPQ9HB71 228 aaKnown RBP11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 UBA2Q9UBT2 640 aaPredicted RBP11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 ZNF222Q9UK12 451 aa11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 CORINQ9Y5Q5 1042 aa11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 NOX1Q9Y5S8 564 aa11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 DNAJB1P25685 340 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 HTR2BP41595 481 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 ZNF135P52742 658 aaPredicted RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 CDC42P60953 191 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 CACNB2Q08289 660 aaPredicted RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 HIST2H2ACQ16777 129 aaPredicted RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 ERAP2Q6P179 960 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 PLEKHM3Q6ZWE6 761 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 OTOP3Q7RTS5 596 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 PIGZQ86VD9 579 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 KIAA0319LQ8IZA0 1049 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 MINDY1Q8N5J2 469 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 C1orf127Q8N9H9 656 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 OLIG1Q8TAK6 271 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 JPH3Q8WXH2 748 aaPredicted RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 PPP3R2Q96LZ3 170 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 SAMD4AQ9UPU9 718 aaKnown RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 A6NL46 340 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC1A7O00341 560 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 KMOO15229 486 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 NBNO60934 754 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 CES1P23141 567 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 MAPK1P28482 360 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 RRM2P31350 389 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC1A2P43004 574 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 MAP2K4P45985 399 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 PRIM2P49643 509 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 CSNK2BP67870 215 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 ABATP80404 500 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 ARHGEF6Q15052 776 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 C5orf22Q49AR2 442 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 FBXO47Q5MNV8 452 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 MARC1Q5VT66 337 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 EIF3MQ7L2H7 374 aaKnown RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 UNC93AQ86WB7 457 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 FDXACB1Q9BRP7 624 aaPredicted RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 TKTL2Q9H0I9 626 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 ATP13A3Q9H7F0 1226 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 TMEM181Q9P2C4 612 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 SSR3Q9UNL2 185 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 PKD1L3Q7Z443 1732 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 CXCR6O00574 342 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 DPYSL4O14531 572 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 PRKACGP22612 351 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 RENBPP51606 427 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 LRP8Q14114 963 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 STARD3Q14849 445 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 HSF5Q4G112 596 aaPredicted RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 TWF2Q6IBS0 349 aaKnown RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 HDDC2Q7Z4H3 204 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 ADAMTS16Q8TE57 1224 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 B3GALT6Q96L58 329 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 FCRL3Q96P31 734 aaPredicted RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC2A11Q9BYW1 496 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 GBA2Q9HCG7 927 aaPredicted RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 ZFP14Q9HCL3 533 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 AMBNQ9NP70 447 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 TMCC3Q9ULS5 477 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 KCNH4Q9UQ05 1017 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 RNF6Q9Y252 685 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 POLR3HQ9Y535 204 aaPredicted RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 HSPB11Q9Y547 144 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 PCDHAC2Q9Y5I4 1007 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 PLOD3O60568 738 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 NPR3P17342 541 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 MZF1P28698 734 aaPredicted RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 GJA9P57773 515 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 COX10Q12887 443 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 LAPTM5Q13571 262 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 TTLL4Q14679 1199 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 USP41Q3LFD5 358 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 CCSAPQ6IQ19 270 aaPredicted RBP11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 SH2D5Q6ZV89 423 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 OR8H3Q8N146 312 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 OR52E6Q96RD3 313 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 TWNKQ96RR1 684 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 FAM118AQ9NWS6 357 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 ERVK-18Q9QC07 812 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 GIMAP2Q9UG22 337 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC13A4Q9UKG4 626 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 TNFSF13BQ9Y275 285 aa11.2□□□□□ -0.62
CRNKL1-204ENST00000490910 TM4SF1P30408 202 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 FMO4P31512 558 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 ADRA1BP35368 520 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 DNAJB13P59910 316 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 SNAP47Q5SQN1 464 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 ZDHHC21Q8IVQ6 265 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 ELMOD1Q8N336 334 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 OR6Q1Q8NGQ2 317 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 NDNFQ8TB73 568 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 CNIH3Q8TBE1 160 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 PTCD2Q8WV60 388 aaKnown RBP11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 OTULINQ96BN8 352 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 GFM1Q96RP9 751 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms