RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PRAMEF33A0A0G2JMD5 474 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 TEX51A0A1B0GUA7 166 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 OR5K4A6NMS3 321 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 DUX1O43812 170 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 PRAMEF10O60809 474 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 FTCDO95954 541 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 ZNF7P17097 686 aaPredicted RBP30.93■■■□□ 2.54
LDB1-204ENST00000490751 MPSTP25325 297 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 TRA2AQ13595 282 aaKnown RBP eCLIP30.93■■■□□ 2.54
LDB1-204ENST00000490751 FAM151BQ6UXP7 276 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 ZNF547Q8IVP9 402 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 UBL4BQ8N7F7 174 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 CCDC110Q8TBZ0 833 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 DTX3LQ8TDB6 740 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 USP7Q93009 1102 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 SH3KBP1Q96B97 665 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 TIMM29Q9BSF4 260 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 DNAJC16Q9Y2G8 782 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 PKP3Q9Y446 797 aa30.93■■■□□ 2.54
LDB1-204ENST00000490751 THRAP10827 490 aa30.92■■■□□ 2.54
LDB1-204ENST00000490751 PRPSAP1Q14558 356 aa30.92■■■□□ 2.54
LDB1-204ENST00000490751 CHRNA6Q15825 494 aa30.92■■■□□ 2.54
LDB1-204ENST00000490751 ARHGAP40Q5TG30 622 aa30.92■■■□□ 2.54
LDB1-204ENST00000490751 TMEM71Q6P5X7 295 aa30.92■■■□□ 2.54
LDB1-204ENST00000490751 SPATA13Q96N96 652 aa30.92■■■□□ 2.54
LDB1-204ENST00000490751 APOL2Q9BQE5 337 aa30.92■■■□□ 2.54
LDB1-204ENST00000490751 WDR70Q9NW82 654 aa30.92■■■□□ 2.54
LDB1-204ENST00000490751 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP30.92■■■□□ 2.54
LDB1-204ENST00000490751 CPNE7Q9UBL6 633 aa30.92■■■□□ 2.54
LDB1-204ENST00000490751 AAR2Q9Y312 384 aaKnown RBP30.92■■■□□ 2.54
LDB1-204ENST00000490751 ZNF106Q9H2Y7 1883 aaKnown RBP30.92■■■□□ 2.54
LDB1-204ENST00000490751 GLYATL1P3A0A0U1RQE8 302 aa30.91■■■□□ 2.54
LDB1-204ENST00000490751 MIF4GDA9UHW6 222 aaKnown RBP30.91■■■□□ 2.54
LDB1-204ENST00000490751 GPR39O43194 453 aa30.91■■■□□ 2.54
LDB1-204ENST00000490751 PTMAP06454 111 aaKnown RBP30.91■■■□□ 2.54
LDB1-204ENST00000490751 CCL4P13236 92 aa30.91■■■□□ 2.54
LDB1-204ENST00000490751 TMEM115Q12893 351 aaPredicted RBP30.91■■■□□ 2.54
LDB1-204ENST00000490751 OLIG2Q13516 323 aa30.91■■■□□ 2.54
LDB1-204ENST00000490751 GTF2H3Q13889 308 aa30.91■■■□□ 2.54
LDB1-204ENST00000490751 FOXJ2Q9P0K8 574 aa30.91■■■□□ 2.54
LDB1-204ENST00000490751 C9orf172C9J069 976 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 STX7O15400 261 aaKnown RBP30.9■■■□□ 2.54
LDB1-204ENST00000490751 DDX3YO15523 660 aaKnown RBP30.9■■■□□ 2.54
LDB1-204ENST00000490751 UGT1A9O60656 530 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 PPFIA2O75334 1257 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 UGT1A6P19224 532 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 UGT1A1P22309 533 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 UGT1A4P22310 534 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 ADRA1AP35348 466 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 UGT1A3P35503 534 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 VAC14Q08AM6 782 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 PTPRCAPQ14761 206 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 RANBP10Q6VN20 620 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 TRAPPC5Q8IUR0 188 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 AVL9Q8NBF6 648 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 BRSK1Q8TDC3 778 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 LDHAL6BQ9BYZ2 381 aaPredicted RBP30.9■■■□□ 2.54
LDB1-204ENST00000490751 UGT1A7Q9HAW7 530 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 UGT1A10Q9HAW8 530 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 UGT1A8Q9HAW9 530 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 SCHIP1Q9P0W5 487 aaPredicted RBP30.9■■■□□ 2.54
LDB1-204ENST00000490751 ARL5AQ9Y689 179 aa30.9■■■□□ 2.54
LDB1-204ENST00000490751 GOLGA6L9A6NEM1 432 aa30.89■■■□□ 2.54
LDB1-204ENST00000490751 PRR19A6NJB7 356 aa30.89■■■□□ 2.54
LDB1-204ENST00000490751 PDZK1P1A8MUH7 402 aa30.89■■■□□ 2.54
LDB1-204ENST00000490751 MAPK9P45984 424 aa30.89■■■□□ 2.54
LDB1-204ENST00000490751 UBE2IP63279 158 aaKnown RBP30.89■■■□□ 2.54
LDB1-204ENST00000490751 ITGA9Q13797 1035 aa30.89■■■□□ 2.54
LDB1-204ENST00000490751 TGIF1Q15583 401 aa30.89■■■□□ 2.54
LDB1-204ENST00000490751 SEPT7Q16181 437 aaKnown RBP30.89■■■□□ 2.54
LDB1-204ENST00000490751 AGBL5Q8NDL9 886 aa30.89■■■□□ 2.54
LDB1-204ENST00000490751 TTC25Q96NG3 672 aa30.89■■■□□ 2.54
LDB1-204ENST00000490751 CAPN6Q9Y6Q1 641 aa30.89■■■□□ 2.54
LDB1-204ENST00000490751 GOLGA6L6A8MZA4 724 aa30.88■■■□□ 2.53
LDB1-204ENST00000490751 GAPDHSO14556 408 aaPredicted RBP30.88■■■□□ 2.53
LDB1-204ENST00000490751 LIPCP11150 499 aa30.88■■■□□ 2.53
LDB1-204ENST00000490751 CSTF2P33240 577 aaKnown RBP eCLIP30.88■■■□□ 2.53
LDB1-204ENST00000490751 CA5AP35218 305 aa30.88■■■□□ 2.53
LDB1-204ENST00000490751 EPHA4P54764 986 aa30.88■■■□□ 2.53
LDB1-204ENST00000490751 LDLRAP1Q5SW96 308 aa30.88■■■□□ 2.53
LDB1-204ENST00000490751 TMEM164Q5U3C3 297 aa30.88■■■□□ 2.53
LDB1-204ENST00000490751 C11orf96Q7Z7L8 435 aa30.88■■■□□ 2.53
LDB1-204ENST00000490751 TTC13Q8NBP0 860 aa30.88■■■□□ 2.53
LDB1-204ENST00000490751 DDHD1Q8NEL9 900 aa30.88■■■□□ 2.53
LDB1-204ENST00000490751 TBC1D10AQ9BXI6 508 aa30.88■■■□□ 2.53
LDB1-204ENST00000490751 ZCCHC2Q9C0B9 1178 aaKnown RBP30.88■■■□□ 2.53
LDB1-204ENST00000490751 EIF4E1BA6NMX2 242 aaKnown RBP30.87■■■□□ 2.53
LDB1-204ENST00000490751 ZNF189O75820 626 aaPredicted RBP30.87■■■□□ 2.53
LDB1-204ENST00000490751 FGF3P11487 239 aaPredicted RBP30.87■■■□□ 2.53
LDB1-204ENST00000490751 LPOP22079 712 aaPredicted RBP30.87■■■□□ 2.53
LDB1-204ENST00000490751 TAF1AQ15573 450 aaPredicted RBP30.87■■■□□ 2.53
LDB1-204ENST00000490751 GPRC6AQ5T6X5 926 aa30.87■■■□□ 2.53
LDB1-204ENST00000490751 WDR74Q6RFH5 385 aaPredicted RBP30.87■■■□□ 2.53
LDB1-204ENST00000490751 CCDC81Q6ZN84 652 aa30.87■■■□□ 2.53
LDB1-204ENST00000490751 ZFAND4Q86XD8 727 aa30.87■■■□□ 2.53
LDB1-204ENST00000490751 NCSTNQ92542 709 aa30.87■■■□□ 2.53
LDB1-204ENST00000490751 PPP1R2P1Q96PQ5 205 aa30.87■■■□□ 2.53
LDB1-204ENST00000490751 CCNL2Q96S94 520 aaPredicted RBP30.87■■■□□ 2.53
LDB1-204ENST00000490751 PDP2Q9P2J9 529 aa30.87■■■□□ 2.53
LDB1-204ENST00000490751 AHCTF1Q8WYP5 2266 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms