RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 MFSD2AQ8NA29 543 aa13.09□□□□□ -0.31
SNX12-205ENST00000490561 EPS8L3Q8TE67 593 aaKnown RBP13.09□□□□□ -0.31
SNX12-205ENST00000490561 KCNJ9Q92806 393 aa13.09□□□□□ -0.31
SNX12-205ENST00000490561 FUBP1Q96AE4 644 aaKnown RBP13.09□□□□□ -0.31
SNX12-205ENST00000490561 PGM2Q96G03 612 aa13.09□□□□□ -0.31
SNX12-205ENST00000490561 ZC3H10Q96K80 434 aaKnown RBP13.09□□□□□ -0.31
SNX12-205ENST00000490561 WDR92Q96MX6 357 aa13.09□□□□□ -0.31
SNX12-205ENST00000490561 ORAI3Q9BRQ5 295 aa13.09□□□□□ -0.31
SNX12-205ENST00000490561 AARSD1Q9BTE6 412 aaKnown RBP13.09□□□□□ -0.31
SNX12-205ENST00000490561 POPDC3Q9HBV1 291 aa13.09□□□□□ -0.31
SNX12-205ENST00000490561 AASDHPPTQ9NRN7 309 aa13.09□□□□□ -0.31
SNX12-205ENST00000490561 EURLQ9NYK6 297 aa13.09□□□□□ -0.31
SNX12-205ENST00000490561 SENP1Q9P0U3 644 aa13.09□□□□□ -0.31
SNX12-205ENST00000490561 KLHL42Q9P2K6 505 aa13.09□□□□□ -0.31
SNX12-205ENST00000490561 GPR34Q9UPC5 381 aa13.09□□□□□ -0.31
SNX12-205ENST00000490561 CRYL1Q9Y2S2 319 aa13.09□□□□□ -0.31
SNX12-205ENST00000490561 DNMT3AQ9Y6K1 912 aaPredicted RBP13.09□□□□□ -0.31
SNX12-205ENST00000490561 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 SMIM23A6NLE4 172 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 E5RI56 91 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 DLL1O00548 723 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 OR1I1O60431 355 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 KCNJ13O60928 360 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 VPS26AO75436 327 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 PIAS1O75925 651 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 CDK14O94921 469 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 GNSP15586 552 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 KRT15P19012 456 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 CD38P28907 300 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 CRABP2P29373 138 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 HOXD12P35452 270 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 SKIV2L2P42285 1042 aaKnown RBP13.08□□□□□ -0.32
SNX12-205ENST00000490561 SLCO1A2P46721 670 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 TEAD4Q15561 434 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 PLK5Q496M5 336 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 HECTD2Q5U5R9 776 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 ADGRG6Q86SQ4 1221 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 TMEFF1Q8IYR6 380 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 RGL4Q8IZJ4 473 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 PELI3Q8N2H9 469 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 ISL2Q96A47 359 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 KLHDC7BQ96G42 594 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 ELMO2Q96JJ3 720 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 CABS1Q96KC9 395 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 BMFQ96LC9 184 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 BIRC8Q96P09 236 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 MYOCQ99972 504 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 OR2AG1Q9H205 316 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 EBF2Q9HAK2 575 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 ZNF446Q9NWS9 450 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 TAS2R13Q9NYV9 303 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 EIF2B4Q9UI10 523 aaKnown RBP13.08□□□□□ -0.32
SNX12-205ENST00000490561 SLC17A4Q9Y2C5 497 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 VWA7Q9Y334 891 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 OR1A2Q9Y585 309 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 KMT2EQ8IZD2 1858 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 BDP1A6H8Y1 2624 aa13.08□□□□□ -0.32
SNX12-205ENST00000490561 POM121BA6NF01 834 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 TRIM49D1C9J1S8 452 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 HRO43593 1189 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 NUAK1O60285 661 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 LILRB5O75023 590 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 FAM155BO75949 473 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 MPOP05164 745 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 THEGLP0DJG4 465 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 STMN1P16949 149 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 CA5AP35218 305 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 DHPSP49366 369 aaPredicted RBP13.07□□□□□ -0.32
SNX12-205ENST00000490561 PRLHRP49683 370 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 CLDN2P57739 230 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 B4GALNT1Q00973 533 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 PLOD1Q02809 727 aaPredicted RBP13.07□□□□□ -0.32
SNX12-205ENST00000490561 USP10Q14694 798 aaKnown RBP13.07□□□□□ -0.32
SNX12-205ENST00000490561 TTLL9Q3SXZ7 439 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 ZNF789Q5FWF6 425 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 CTSL3PQ5NE16 218 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 MROH9Q5TGP6 573 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 AGBL2Q5U5Z8 902 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 TMEM220Q6QAJ8 160 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 Q6ZSR6 202 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 LRRTM4Q86VH4 590 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 DCLK2Q8N568 766 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 DEFB119Q8N690 84 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 OR56A4Q8NGH8 313 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 ACMSDQ8TDX5 336 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 ATXN7L3BQ96GX2 97 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 LINC00615Q96LM1 132 aaPredicted RBP13.07□□□□□ -0.32
SNX12-205ENST00000490561 SLC6A18Q96N87 628 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 BOCQ9BWV1 1114 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 IRF2BPLQ9H1B7 796 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 MIR1-1HGQ9H1L0 117 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 TMBIM4Q9HC24 238 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 TM9SF3Q9HD45 589 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 GPR27Q9NS67 375 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 ATXN10Q9UBB4 475 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 TBK1Q9UHD2 729 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 TRMT6Q9UJA5 497 aaKnown RBP13.07□□□□□ -0.32
SNX12-205ENST00000490561 SLC39A10Q9ULF5 831 aa13.07□□□□□ -0.32
SNX12-205ENST00000490561 MTO1Q9Y2Z2 717 aaKnown RBP13.07□□□□□ -0.32
SNX12-205ENST00000490561 OAS3Q9Y6K5 1087 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms