RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 ERVH48-1M5A8F1 160 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 CHUKO15111 745 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 KMOO15229 486 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 KCNN4O15554 427 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 CDK14O94921 469 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 EPOP01588 193 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 PTMAP06454 111 aaKnown RBP10.21□□□□□ -0.77
RBM39-236ENST00000490484 FGF3P11487 239 aaPredicted RBP10.21□□□□□ -0.77
RBM39-236ENST00000490484 PSMB4P28070 264 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 CSTF2P33240 577 aaKnown RBP eCLIP10.21□□□□□ -0.77
RBM39-236ENST00000490484 PTPN7P35236 360 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 RWDD2BP57060 319 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 EIF3EP60228 445 aaKnown RBP10.21□□□□□ -0.77
RBM39-236ENST00000490484 RHDQ02161 417 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 OLIG2Q13516 323 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 TRA2AQ13595 282 aaKnown RBP eCLIP10.21□□□□□ -0.775e-8■□□□□ 10.6
RBM39-236ENST00000490484 GTF2H3Q13889 308 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 KIR2DS5Q14953 304 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 TMEM164Q5U3C3 297 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 KIAA1614Q5VZ46 1190 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 ZDHHC20Q5W0Z9 365 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 ITPRIPL1Q6GPH6 555 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 TMEM71Q6P5X7 295 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 INO80CQ6PI98 192 aaPredicted RBP10.21□□□□□ -0.77
RBM39-236ENST00000490484 PCSK4Q6UW60 755 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 VASH2Q86V25 355 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 LRRTM4Q86VH4 590 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 ZNF547Q8IVP9 402 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 TRIM48Q8IWZ4 208 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 LRRC57Q8N9N7 239 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 AGBL5Q8NDL9 886 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 JPH3Q8WXH2 748 aaPredicted RBP10.21□□□□□ -0.77
RBM39-236ENST00000490484 DPYSL5Q9BPU6 564 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 APOL2Q9BQE5 337 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 FERMT1Q9BQL6 677 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 TIMM29Q9BSF4 260 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 IL26Q9NPH9 171 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 HACD3Q9P035 362 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 SCHIP1Q9P0W5 487 aaPredicted RBP10.21□□□□□ -0.77
RBM39-236ENST00000490484 SLC23A2Q9UGH3 650 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 KLHL3Q9UH77 587 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 PKP3Q9Y446 797 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 ARL5AQ9Y689 179 aa10.21□□□□□ -0.77
RBM39-236ENST00000490484 GCN1Q92616 2671 aaKnown RBP10.21□□□□□ -0.78
RBM39-236ENST00000490484 ZNF106Q9H2Y7 1883 aaKnown RBP10.21□□□□□ -0.78
RBM39-236ENST00000490484 A0A0U1RQJ8 604 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 EFCAB7A8K855 629 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 A8MU76 341 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 VEGFDO43915 354 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 C1QL1O75973 258 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 ANXA9O76027 345 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 STK10O94804 968 aaKnown RBP10.2□□□□□ -0.78
RBM39-236ENST00000490484 TJP3O95049 919 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 PRAMEF1O95521 474 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 AGTP01019 485 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 RBP3P10745 1247 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 PYGMP11217 842 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 ZNF7P17097 686 aaPredicted RBP10.2□□□□□ -0.78
RBM39-236ENST00000490484 RPL10P27635 214 aaKnown RBP10.2□□□□□ -0.78
RBM39-236ENST00000490484 EPHA4P54764 986 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 DRG2P55039 364 aaKnown RBP10.2□□□□□ -0.78
RBM39-236ENST00000490484 GEMP55040 296 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 UBE2IP63279 158 aaKnown RBP10.2□□□□□ -0.78
RBM39-236ENST00000490484 SQSTM1Q13501 440 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 PTPRCAPQ14761 206 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 CHRNA6Q15825 494 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 MANEAQ5SRI9 462 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 DARS2Q6PI48 645 aaKnown RBP10.2□□□□□ -0.78
RBM39-236ENST00000490484 WDR74Q6RFH5 385 aaPredicted RBP10.2□□□□□ -0.78
RBM39-236ENST00000490484 PEX26Q7Z412 305 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 TMEM139Q8IV31 216 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 AVL9Q8NBF6 648 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 SPC24Q8NBT2 197 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 CCDC112Q8NEF3 446 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 CCDC110Q8TBZ0 833 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 SNRNP27Q8WVK2 155 aaKnown RBP10.2□□□□□ -0.78
RBM39-236ENST00000490484 NCSTNQ92542 709 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 ART4Q93070 314 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 SH3KBP1Q96B97 665 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 SPATA13Q96N96 652 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 TTC25Q96NG3 672 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 TBC1D10AQ9BXI6 508 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 ZCCHC2Q9C0B9 1178 aaKnown RBP10.2□□□□□ -0.78
RBM39-236ENST00000490484 OCIAD1Q9NX40 245 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 IL17CQ9P0M4 197 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 PACSIN2Q9UNF0 486 aaPredicted RBP10.2□□□□□ -0.78
RBM39-236ENST00000490484 EFR3BQ9Y2G0 817 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 PCDHB11Q9Y5F2 797 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 BOD1L1Q8NFC6 3051 aa10.2□□□□□ -0.78
RBM39-236ENST00000490484 SDK2Q58EX2 2172 aa10.19□□□□□ -0.78
RBM39-236ENST00000490484 LILRA5A6NI73 299 aa10.19□□□□□ -0.78
RBM39-236ENST00000490484 OR5K4A6NMS3 321 aa10.19□□□□□ -0.78
RBM39-236ENST00000490484 OR52A4PA6NMU1 304 aa10.19□□□□□ -0.78
RBM39-236ENST00000490484 STMND1H3BQB6 276 aa10.19□□□□□ -0.78
RBM39-236ENST00000490484 TK2O00142 265 aa10.19□□□□□ -0.78
RBM39-236ENST00000490484 GAPDHSO14556 408 aaPredicted RBP10.19□□□□□ -0.78
RBM39-236ENST00000490484 EFSO43281 561 aa10.19□□□□□ -0.78
RBM39-236ENST00000490484 UGT1A9O60656 530 aa10.19□□□□□ -0.78
RBM39-236ENST00000490484 FTCDO95954 541 aa10.19□□□□□ -0.78
RBM39-236ENST00000490484 VIPP01282 170 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms