RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 S1PR1P21453 382 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 UGT1A1P22309 533 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 HRH2P25021 359 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 KRT20P35900 424 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 TMPOP42166 694 aaKnown RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 HSD17B4P51659 736 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 HILS1P60008 231 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 TMF1P82094 1093 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 COG7P83436 770 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 NUCB1Q02818 461 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 LCN10Q6JVE6 187 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 FBXL22Q6P050 247 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 RAD9BQ6WBX8 426 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 CCNI2Q6ZMN8 369 aaPredicted RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 ATG9AQ7Z3C6 839 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 GPR180Q86V85 440 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 ARID3BQ8IVW6 561 aaPredicted RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 MAP7D3Q8IWC1 876 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 HACE1Q8IYU2 909 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 EMC1Q8N766 993 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 LILRB1Q8NHL6 650 aaPredicted RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 UTP15Q8TED0 518 aaKnown RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 TRPC4APQ8TEL6 797 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 ABTB1Q969K4 478 aaPredicted RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 TAAR8Q969N4 342 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 TMEM19Q96HH6 336 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 DDOQ99489 341 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 GFI1Q99684 422 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 C1QTNF1Q9BXJ1 281 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 C6orf106Q9H6K1 298 aaPredicted RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 MAGIXQ9H6Y5 334 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 GAREM1Q9H706 876 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 DNAJC18Q9H819 358 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 ZNF556Q9HAH1 456 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 PCDH9Q9HC56 1237 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 MCM9Q9NXL9 1143 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 WSB2Q9NYS7 404 aaPredicted RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 SMARCAL1Q9NZC9 954 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 MRPL15Q9P015 296 aaKnown RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 UBA2Q9UBT2 640 aaPredicted RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 TSPYL4Q9UJ04 414 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 DBNLQ9UJU6 430 aaKnown RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 PCDHGB1Q9Y5G3 927 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 PCDHGA5Q9Y5G8 931 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 MAGED1Q9Y5V3 778 aaPredicted RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 A0A1B0GUV1 79 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 GOLGA6L9A6NEM1 432 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 HNRNPCL2B2RXH8 293 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 TMEM189-UBE2V1I3L0A0 370 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 J3QR06 171 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 SH2B2O14492 632 aaPredicted RBP3.17□□□□□ -1.9
CD46-215ENST00000488596 P4HA2O15460 535 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 ADAM20O43506 726 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 ZNF217O75362 1048 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 TRIM21P19474 475 aaKnown RBP3.17□□□□□ -1.9
CD46-215ENST00000488596 NNMTP40261 264 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 SEC61A1P61619 476 aaKnown RBP3.17□□□□□ -1.9
CD46-215ENST00000488596 KIF5AQ12840 1032 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 UBE2V1Q13404 147 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 SLC39A14Q15043 492 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 NTRK2Q16620 822 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 IZUMO4Q1ZYL8 232 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 MYLK3Q32MK0 819 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 KRTAP24-1Q3LI83 254 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 KRTCAP3Q53RY4 240 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 PAPD4Q6PIY7 484 aaKnown RBP3.17□□□□□ -1.9
CD46-215ENST00000488596 TMCO3Q6UWJ1 677 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 CREB3L2Q70SY1 520 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 ARMC9Q7Z3E5 817 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 FOXP4Q8IVH2 680 aaPredicted RBP3.17□□□□□ -1.9
CD46-215ENST00000488596 OR8H2Q8N162 312 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 ZNF441Q8N8Z8 693 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 APPL2Q8NEU8 664 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 TMEM255BQ8WV15 326 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 RTP4Q96DX8 246 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 ADGRG7Q96K78 797 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 GCNAQ96QF7 691 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 ABHD1Q96SE0 405 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 SLF1Q9BQI6 1058 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 TEX12Q9BXU0 123 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 TM6SF1Q9BZW5 370 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 KLHL4Q9C0H6 718 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 TMEM39BQ9GZU3 492 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 CSTL1Q9H114 145 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 SIL1Q9H173 461 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 PPIL3Q9H2H8 161 aaKnown RBP3.17□□□□□ -1.9
CD46-215ENST00000488596 RAD21L1Q9H4I0 556 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 GIMAP4Q9NUV9 329 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 NKIRAS2Q9NYR9 191 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 DNAJB4Q9UDY4 337 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 CHORDC1Q9UHD1 332 aaPredicted RBP3.17□□□□□ -1.9
CD46-215ENST00000488596 NRBP1Q9UHY1 535 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 SIX4Q9UIU6 781 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 EXO1Q9UQ84 846 aaKnown RBP3.17□□□□□ -1.9
CD46-215ENST00000488596 PTPRCP08575 1304 aa3.17□□□□□ -1.9
CD46-215ENST00000488596 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 TMEM8BA6NDV4 472 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 MAP2K7O14733 419 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 ZBTB43O43298 467 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 AVILO75366 819 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms