RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TIMM29Q9BSF4 260 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 ZCCHC2Q9C0B9 1178 aaKnown RBP17.5■□□□□ 0.39
ITGB1-215ENST00000488494 PRDM8Q9NQV8 689 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 TMEM9Q9P0T7 183 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 GUCA1BQ9UMX6 200 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 KIR2DS5A0A0G2JLQ3 304 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 A0A0G2JNG1 304 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 IGHV5-10-1A0A0J9YXX1 117 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 KIR2DS3K7RE56 304 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 STX7O15400 261 aaKnown RBP17.49■□□□□ 0.39
ITGB1-215ENST00000488494 ARHGAP6O43182 974 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 DUX1O43812 170 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 UGT1A9O60656 530 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 PPFIA2O75334 1257 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 PRAMEF1O95521 474 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 HOXB3P14651 431 aaPredicted RBP17.49■□□□□ 0.39
ITGB1-215ENST00000488494 UGT1A6P19224 532 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 UGT1A1P22309 533 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 UGT1A4P22310 534 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 SLC5A2P31639 672 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 CA5AP35218 305 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 UGT1A3P35503 534 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 ETV5P41161 510 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 CLCNKAP51800 687 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 GPLD1P80108 840 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 SPARCL1Q14515 664 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 KIR2DS5Q14953 304 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 TAF1AQ15573 450 aaPredicted RBP17.49■□□□□ 0.39
ITGB1-215ENST00000488494 BROXQ5VW32 411 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 ZNF574Q6ZN55 896 aaPredicted RBP17.49■□□□□ 0.39
ITGB1-215ENST00000488494 SLC9B2Q86UD5 537 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 DDHD1Q8NEL9 900 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 OR4D9Q8NGE8 314 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 OR10G6Q8NH81 332 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 ATG4AQ8WYN0 398 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 AHCYL2Q96HN2 611 aaKnown RBP17.49■□□□□ 0.39
ITGB1-215ENST00000488494 PRORYQ9H606 182 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 UGT1A7Q9HAW7 530 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 UGT1A10Q9HAW8 530 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 UGT1A8Q9HAW9 530 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 PCDHGA7Q9Y5G6 932 aa17.49■□□□□ 0.39
ITGB1-215ENST00000488494 C5orf60A6NFR6 353 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 C2orf81A6NN90 581 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 PDZK1P1A8MUH7 402 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 KRT86O43790 486 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 THRAP10827 490 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 MPSTP25325 297 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 MAPK9P45984 424 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 GDF10P55107 478 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 CXADRP78310 365 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 CFHR1Q03591 330 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 ITGA9Q13797 1035 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 LDLRAP1Q5SW96 308 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 GPRC6AQ5T6X5 926 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 SEL1L2Q5TEA6 688 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 CCDC112Q8NEF3 446 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 OR4K2Q8NGD2 314 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 SLC35B2Q8TB61 432 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 DTX3LQ8TDB6 740 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 TTC25Q96NG3 672 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 TMEM121Q9BTD3 319 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 DPH1Q9BZG8 443 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 SMOXQ9NWM0 555 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.48■□□□□ 0.395e-6■□□□□ 9.7
ITGB1-215ENST00000488494 AKAP7Q9P0M2 348 aaPredicted RBP17.48■□□□□ 0.39
ITGB1-215ENST00000488494 SCHIP1Q9P0W5 487 aaPredicted RBP17.48■□□□□ 0.39
ITGB1-215ENST00000488494 CPNE7Q9UBL6 633 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 FKBPLQ9UIM3 349 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 KCTD3Q9Y597 815 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 PTPRQQ9UMZ3 2332 aa17.48■□□□□ 0.39
ITGB1-215ENST00000488494 PRAMEF33A0A0G2JMD5 474 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 PRR19A6NJB7 356 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 HGSO14964 777 aaPredicted RBP17.47■□□□□ 0.39
ITGB1-215ENST00000488494 PRAMEF10O60809 474 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 VCLP18206 1134 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 LPOP22079 712 aaPredicted RBP17.47■□□□□ 0.39
ITGB1-215ENST00000488494 AKT1P31749 480 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 ZNF140P52738 457 aaPredicted RBP17.47■□□□□ 0.39
ITGB1-215ENST00000488494 LIMK2P53671 638 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 MAPK10P53779 464 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 TMPRSS3P57727 454 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 UBE2IP63279 158 aaKnown RBP17.47■□□□□ 0.39
ITGB1-215ENST00000488494 TMEM115Q12893 351 aaPredicted RBP17.47■□□□□ 0.39
ITGB1-215ENST00000488494 CLN3Q13286 438 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 DENND5AQ6IQ26 1287 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 C11orf96Q7Z7L8 435 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 TRIM48Q8IWZ4 208 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 KLHDC8BQ8IXV7 354 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 TAB3Q8N5C8 712 aaPredicted RBP17.47■□□□□ 0.39
ITGB1-215ENST00000488494 RASGEF1AQ8N9B8 481 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 AVL9Q8NBF6 648 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 SH3KBP1Q96B97 665 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 LRRC45Q96CN5 670 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 CCDC97Q96F63 343 aaPredicted RBP17.47■□□□□ 0.39
ITGB1-215ENST00000488494 DPYSL5Q9BPU6 564 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 CPNE5Q9HCH3 593 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 FOXJ2Q9P0K8 574 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 MGAQ8IWI9 3026 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 UNC13CQ8NB66 2214 aa17.47■□□□□ 0.39
ITGB1-215ENST00000488494 CACNA1GO43497 2377 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms