RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 MIPEPQ99797 713 aa20.02■□□□□ 0.79
NECAB3-213ENST00000488489 ILKAPQ9H0C8 392 aaPredicted RBP20.02■□□□□ 0.79
NECAB3-213ENST00000488489 CDH19Q9H159 772 aa20.02■□□□□ 0.79
NECAB3-213ENST00000488489 ZDHHC2Q9UIJ5 367 aa20.02■□□□□ 0.79
NECAB3-213ENST00000488489 TMPRSS11EQ9UL52 423 aa20.02■□□□□ 0.79
NECAB3-213ENST00000488489 CDC7O00311 574 aa20.01■□□□□ 0.79
NECAB3-213ENST00000488489 KPNA3O00505 521 aaPredicted RBP20.01■□□□□ 0.79
NECAB3-213ENST00000488489 PPARGP37231 505 aaPredicted RBP20.01■□□□□ 0.79
NECAB3-213ENST00000488489 RALGDSQ12967 914 aa20.01■□□□□ 0.79
NECAB3-213ENST00000488489 TUBB3Q13509 450 aa20.01■□□□□ 0.79
NECAB3-213ENST00000488489 PIWIL4Q7Z3Z4 852 aaKnown RBP20.01■□□□□ 0.79
NECAB3-213ENST00000488489 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.01■□□□□ 0.792e-6■■■■■ 163.7
NECAB3-213ENST00000488489 TEX9Q8N6V9 391 aa20.01■□□□□ 0.79
NECAB3-213ENST00000488489 EXT2Q93063 718 aa20.01■□□□□ 0.79
NECAB3-213ENST00000488489 SCAMP4Q969E2 229 aa20.01■□□□□ 0.79
NECAB3-213ENST00000488489 CCDC126Q96EE4 140 aa20.01■□□□□ 0.79
NECAB3-213ENST00000488489 SIKE1Q9BRV8 207 aa20.01■□□□□ 0.79
NECAB3-213ENST00000488489 NMUR2Q9GZQ4 415 aa20.01■□□□□ 0.79
NECAB3-213ENST00000488489 WWP1Q9H0M0 922 aa20.01■□□□□ 0.79
NECAB3-213ENST00000488489 FBRSL1Q9HCM7 1045 aaKnown RBP20.01■□□□□ 0.79
NECAB3-213ENST00000488489 RAP2CQ9Y3L5 183 aa20.01■□□□□ 0.79
NECAB3-213ENST00000488489 UBXN8O00124 270 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 ARNTLO00327 626 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 CCDC22O60826 627 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 CYP2A6P11509 494 aaPredicted RBP20■□□□□ 0.79
NECAB3-213ENST00000488489 HNRNPLP14866 589 aaKnown RBP eCLIP20■□□□□ 0.79
NECAB3-213ENST00000488489 ZNF30P17039 623 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 ZBTB16Q05516 673 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 ASPHQ12797 758 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 GRIN2CQ14957 1233 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 TSNQ15631 228 aaKnown RBP20■□□□□ 0.79
NECAB3-213ENST00000488489 PTRHD1Q6GMV3 140 aaKnown RBP20■□□□□ 0.79
NECAB3-213ENST00000488489 Q6ZVL8 140 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 NKAPQ8N5F7 415 aaKnown RBP20■□□□□ 0.79
NECAB3-213ENST00000488489 MAPK15Q8TD08 544 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 PTCD3Q96EY7 689 aaKnown RBP20■□□□□ 0.79
NECAB3-213ENST00000488489 ACOX2Q99424 681 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 TTC1Q99614 292 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 COG4Q9H9E3 785 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 PPM1HQ9ULR3 514 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 DHRS7Q9Y394 339 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 EDDM13A0A1B0GTR0 161 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 NPHS1O60500 1241 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 KAT7O95251 611 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 ITGB6P18564 788 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 ETV3P41162 512 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 IL12RB1P42701 662 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 IDH3AP50213 366 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 IL2P60568 153 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 B4GALNT1Q00973 533 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 LYPLAL1Q5VWZ2 237 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 SERPINA13PQ6UXR4 307 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 HCAR2Q8TDS4 363 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 ERLEC1Q96DZ1 483 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 FAM129BQ96TA1 746 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 CADM1Q9BY67 442 aaKnown RBP20■□□□□ 0.79
NECAB3-213ENST00000488489 DCLRE1BQ9H816 532 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 ITM2BQ9Y287 266 aa20■□□□□ 0.79
NECAB3-213ENST00000488489 F5P12259 2224 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 FCHO1O14526 889 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 IMPDH1P20839 514 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 RPL14P50914 215 aaKnown RBP19.99■□□□□ 0.79
NECAB3-213ENST00000488489 ATP6V0D1P61421 351 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 CFAP157Q5JU67 520 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 SLC22A9Q8IVM8 553 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 STAG3L4Q8TBR4 150 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 FUBP1Q96AE4 644 aaKnown RBP19.99■□□□□ 0.79
NECAB3-213ENST00000488489 LINGO1Q96FE5 620 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 CNDP1Q96KN2 507 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 RIPOR3Q96MK2 946 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 RILPQ96NA2 401 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 BTBD10Q9BSF8 475 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 ARL8BQ9NVJ2 186 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 PKD2L2Q9NZM6 624 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 ARMCX1Q9P291 453 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 MBD1Q9UIS9 605 aaPredicted RBP19.99■□□□□ 0.79
NECAB3-213ENST00000488489 GNPTGQ9UJJ9 305 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 NPEPPSL1A6NEC2 478 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 F8W8V4 182 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 MATN2O00339 956 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 BTN3A1O00481 513 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 SPINT1O43278 529 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 KERAO60938 352 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 ENTPD5O75356 428 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 PRNPP04156 253 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 MMP12P39900 470 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 SOX9P48436 509 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 NFKB2Q00653 900 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 PRKAA1Q13131 559 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 DPPA4Q7L190 304 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 PIP4K2CQ8TBX8 421 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 MSLNLQ96KJ4 702 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 TRMT61BQ9BVS5 477 aaKnown RBP19.99■□□□□ 0.79
NECAB3-213ENST00000488489 DNAJC28Q9NX36 388 aa19.99■□□□□ 0.79
NECAB3-213ENST00000488489 DENND4AQ7Z401 1863 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 SLC25A14O95258 325 aaPredicted RBP19.98■□□□□ 0.79
NECAB3-213ENST00000488489 ATP6V1C1P21283 382 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 XPAP23025 273 aaPredicted RBP19.98■□□□□ 0.79
NECAB3-213ENST00000488489 ELAVL3Q14576 367 aaKnown RBP19.98■□□□□ 0.79
NECAB3-213ENST00000488489 PFKFB4Q16877 469 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms