RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 FBXO46Q6PJ61 603 aaPredicted RBP4.3□□□□□ -1.72
ITGB1-214ENST00000488427 SARM1Q6SZW1 724 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 TMTC3Q6ZXV5 915 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 TUBA1AQ71U36 451 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 TMTC2Q8N394 836 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 FRMD1Q8N878 549 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 NEXN-AS1Q8NBZ9 246 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 LMO3Q8TAP4 145 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 ARHGEF26Q96DR7 871 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 PABPC5Q96DU9 382 aaKnown RBP4.3□□□□□ -1.72
ITGB1-214ENST00000488427 RRNAD1Q96FB5 475 aaKnown RBP4.3□□□□□ -1.72
ITGB1-214ENST00000488427 CCDC34Q96HJ3 373 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 MPP4Q96JB8 637 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 QRFPRQ96P65 431 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 TUBA1CQ9BQE3 449 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 EBF2Q9HAK2 575 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 PLSCR4Q9NRQ2 329 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 KCNE2Q9Y6J6 123 aa4.3□□□□□ -1.72
ITGB1-214ENST00000488427 DICER1Q9UPY3 1922 aaKnown RBP4.3□□□□□ -1.72
ITGB1-214ENST00000488427 SPATA31E1Q6ZUB1 1445 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 A0A0G2JPF8 293 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 A0A1B0GUV1 79 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 NPIPB15A6NHN6 443 aaPredicted RBP4.29□□□□□ -1.72
ITGB1-214ENST00000488427 HNRNPCL3B7ZW38 293 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 SCAMP1O15126 338 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 KDM4BO94953 1096 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 PPP1R3DO95685 299 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 CYC1P08574 325 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 HNRNPCL4P0DMR1 293 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 G6PDP11413 515 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 ACTN1P12814 892 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 NFKBIAP25963 317 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 PRCPP42785 496 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 ERVFC1-1P60608 527 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 RPS3AP61247 264 aaKnown RBP4.29□□□□□ -1.72
ITGB1-214ENST00000488427 MPP1Q00013 466 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 EEF1A2Q05639 463 aaKnown RBP4.29□□□□□ -1.72
ITGB1-214ENST00000488427 NIPAL4Q0D2K0 466 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 TMEM115Q12893 351 aaPredicted RBP4.29□□□□□ -1.72
ITGB1-214ENST00000488427 COL28A1Q2UY09 1125 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 DEFB115Q30KQ5 88 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 ZNF672Q499Z4 452 aaPredicted RBP4.29□□□□□ -1.72
ITGB1-214ENST00000488427 KCNT1Q5JUK3 1230 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 QSOX2Q6ZRP7 698 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 RSRC2Q7L4I2 434 aaKnown RBP4.29□□□□□ -1.72
ITGB1-214ENST00000488427 GPR180Q86V85 440 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 RNF168Q8IYW5 571 aaPredicted RBP4.29□□□□□ -1.72
ITGB1-214ENST00000488427 RNF113BQ8IZP6 322 aaKnown RBP4.29□□□□□ -1.72
ITGB1-214ENST00000488427 CNTROBQ8N137 903 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 PDILTQ8N807 584 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 MAB21L3Q8N8X9 362 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 POC1AQ8NBT0 407 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 TMEM116Q8NCL8 245 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 TDRD7Q8NHU6 1098 aaKnown RBP4.29□□□□□ -1.72
ITGB1-214ENST00000488427 THAP6Q8TBB0 222 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 UCMAQ8WVF2 138 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 ARHGEF2Q92974 986 aaKnown RBP4.29□□□□□ -1.72
ITGB1-214ENST00000488427 GAREM1Q9H706 876 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 SH2D4AQ9H788 454 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 SLC28A3Q9HAS3 691 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 NOX4Q9NPH5 578 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 RRP7BPQ9NSQ0 103 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 CWC15Q9P013 229 aaKnown RBP4.29□□□□□ -1.72
ITGB1-214ENST00000488427 LAS1LQ9Y4W2 734 aaKnown RBP4.29□□□□□ -1.72
ITGB1-214ENST00000488427 LRP12Q9Y561 859 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 CAPN7Q9Y6W3 813 aa4.29□□□□□ -1.72
ITGB1-214ENST00000488427 ANKRD30BQ9BXX2 1392 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 TAF1LQ8IZX4 1826 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 PPLO60437 1756 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 FAM237AA0A1B0GTK4 181 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 KANSL1LA0AUZ9 987 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 JRKO75564 520 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 NKX2-2O95096 273 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 F7P08709 466 aaPredicted RBP4.28□□□□□ -1.72
ITGB1-214ENST00000488427 ATP1A3P13637 1013 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 AMD1P17707 334 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 DGKAP23743 735 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 EIF2S3P41091 472 aaKnown RBP4.28□□□□□ -1.72
ITGB1-214ENST00000488427 PIK3CAP42336 1068 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 NAP1L1P55209 391 aaKnown RBP4.28□□□□□ -1.72
ITGB1-214ENST00000488427 NLRP5P59047 1200 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 MAMLD1Q13495 774 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 NAB2Q15742 525 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 TSTQ16762 297 aaKnown RBP4.28□□□□□ -1.72
ITGB1-214ENST00000488427 C2orf68Q2NKX9 166 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 EIF2S3LQ2VIR3 472 aaKnown RBP4.28□□□□□ -1.72
ITGB1-214ENST00000488427 ANKRD54Q6NXT1 300 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 DPPA4Q7L190 304 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 CERS3Q8IU89 383 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 ARHGAP12Q8IWW6 846 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 TEX11Q8IYF3 940 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 ADSSL1Q8N142 457 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 PPP4R1Q8TF05 950 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 TIGD1Q96MW7 591 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 NEUROD6Q96NK8 337 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 ACOX2Q99424 681 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 USP44Q9H0E7 712 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 TKTL2Q9H0I9 626 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 EVA1AQ9H8M9 152 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 ZNF556Q9HAH1 456 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms