RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 TIMM29Q9BSF4 260 aa23.26■■□□□ 1.31
PLOD3-215ENST00000487563 TBC1D10AQ9BXI6 508 aa23.26■■□□□ 1.31
PLOD3-215ENST00000487563 HEMGNQ9BXL5 484 aa23.26■■□□□ 1.31
PLOD3-215ENST00000487563 FSD1LQ9BXM9 530 aa23.26■■□□□ 1.31
PLOD3-215ENST00000487563 HACD3Q9P035 362 aa23.26■■□□□ 1.31
PLOD3-215ENST00000487563 PDP2Q9P2J9 529 aa23.26■■□□□ 1.31
PLOD3-215ENST00000487563 RSPH14Q9UHP6 348 aa23.26■■□□□ 1.31
PLOD3-215ENST00000487563 GCN1Q92616 2671 aaKnown RBP23.26■■□□□ 1.31
PLOD3-215ENST00000487563 LOC285095A0A1B0GVY8 99 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 MACROD2A1Z1Q3 448 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 LILRA5A6NI73 299 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 H7C0C1 242 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 IPO7O95373 1038 aaKnown RBP23.25■■□□□ 1.31
PLOD3-215ENST00000487563 EPOP01588 193 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 PLA2G2AP14555 144 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 VCLP18206 1134 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 HMGCLP35914 325 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 CHRNA4P43681 627 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 ATP5OP48047 213 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 PPP2R5EQ16537 467 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 ATP13A5Q4VNC0 1218 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 ZDHHC20Q5W0Z9 365 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 ANKS6Q68DC2 871 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 GLT6D1Q7Z4J2 308 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 BLOC1S5Q8TDH9 187 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 KRT35Q92764 455 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 FERMT1Q9BQL6 677 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 SLC23A2Q9UGH3 650 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 TRHDEQ9UKU6 1024 aa23.25■■□□□ 1.31
PLOD3-215ENST00000487563 SDK2Q58EX2 2172 aa23.24■■□□□ 1.31
PLOD3-215ENST00000487563 HLA-DPA1P20036 260 aa23.24■■□□□ 1.31
PLOD3-215ENST00000487563 SPAM1P38567 509 aa23.24■■□□□ 1.31
PLOD3-215ENST00000487563 NAP1L1P55209 391 aaKnown RBP23.24■■□□□ 1.31
PLOD3-215ENST00000487563 UBE2IP63279 158 aaKnown RBP23.24■■□□□ 1.31
PLOD3-215ENST00000487563 MPP3Q13368 585 aa23.24■■□□□ 1.31
PLOD3-215ENST00000487563 KHDC1Q4VXA5 237 aaKnown RBP23.24■■□□□ 1.31
PLOD3-215ENST00000487563 BBS12Q6ZW61 710 aa23.24■■□□□ 1.31
PLOD3-215ENST00000487563 PLXDC1Q8IUK5 500 aa23.24■■□□□ 1.31
PLOD3-215ENST00000487563 TTC30BQ8N4P2 665 aa23.24■■□□□ 1.31
PLOD3-215ENST00000487563 NKD1Q969G9 470 aa23.24■■□□□ 1.31
PLOD3-215ENST00000487563 OXNAD1Q96HP4 312 aaPredicted RBP23.24■■□□□ 1.31
PLOD3-215ENST00000487563 MRGPRX2Q96LB1 330 aa23.24■■□□□ 1.31
PLOD3-215ENST00000487563 TEFMQ96QE5 360 aaKnown RBP23.24■■□□□ 1.31
PLOD3-215ENST00000487563 ZCCHC2Q9C0B9 1178 aaKnown RBP23.24■■□□□ 1.31
PLOD3-215ENST00000487563 APOC4-APOC2K7ER74 178 aa23.23■■□□□ 1.31
PLOD3-215ENST00000487563 APOC2P02655 101 aa23.23■■□□□ 1.31
PLOD3-215ENST00000487563 ITGB2P05107 769 aa23.23■■□□□ 1.31
PLOD3-215ENST00000487563 XRCC1P18887 633 aaPredicted RBP23.23■■□□□ 1.31
PLOD3-215ENST00000487563 IDSP22304 550 aa23.23■■□□□ 1.31
PLOD3-215ENST00000487563 UGT1A3P35503 534 aa23.23■■□□□ 1.31
PLOD3-215ENST00000487563 ARSDP51689 593 aa23.23■■□□□ 1.31
PLOD3-215ENST00000487563 SLC1A5Q15758 541 aa23.23■■□□□ 1.31
PLOD3-215ENST00000487563 ARHGAP22Q7Z5H3 698 aa23.23■■□□□ 1.31
PLOD3-215ENST00000487563 CACNA2D3Q8IZS8 1091 aa23.23■■□□□ 1.31
PLOD3-215ENST00000487563 EXTL1Q92935 676 aa23.23■■□□□ 1.31
PLOD3-215ENST00000487563 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.23■■□□□ 1.31
PLOD3-215ENST00000487563 SCHIP1Q9P0W5 487 aaPredicted RBP23.23■■□□□ 1.31
PLOD3-215ENST00000487563 PKP3Q9Y446 797 aa23.23■■□□□ 1.31
PLOD3-215ENST00000487563 RAD1O60671 282 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 WT1P19544 449 aaPredicted RBP23.22■■□□□ 1.31
PLOD3-215ENST00000487563 CTNNA2P26232 953 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 COPS2P61201 443 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 MC2RQ01718 297 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 TMEM115Q12893 351 aaPredicted RBP23.22■■□□□ 1.31
PLOD3-215ENST00000487563 XRCC4Q13426 336 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 ITPRIPL1Q6GPH6 555 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 FAM151BQ6UXP7 276 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 CEACAM20Q6UY09 585 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 TMEM26Q6ZUK4 368 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 ZNF547Q8IVP9 402 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 BMPERQ8N8U9 685 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 BRSK1Q8TDC3 778 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 CXorf40BQ96DE9 158 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 CTRCQ99895 268 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 UCK1Q9HA47 277 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 IL26Q9NPH9 171 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 TRIM10Q9UDY6 481 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 TMPRSS11EQ9UL52 423 aa23.22■■□□□ 1.31
PLOD3-215ENST00000487563 COL6A6A6NMZ7 2263 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 GLYATL1P3A0A0U1RQE8 302 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 SOWAHDA6NJG2 315 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 BUD23O43709 281 aaKnown RBP23.21■■□□□ 1.31
PLOD3-215ENST00000487563 ANXA9O76027 345 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 UBXN7O94888 489 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 NDUFA10O95299 355 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 TYRP1P17643 537 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 AMD1P17707 334 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 RPL10P27635 214 aaKnown RBP23.21■■□□□ 1.31
PLOD3-215ENST00000487563 RBL1P28749 1068 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 SLC19A1P41440 591 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 DRG2P55039 364 aaKnown RBP23.21■■□□□ 1.31
PLOD3-215ENST00000487563 GEMP55040 296 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 CHRNA6Q15825 494 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 LDLRAP1Q5SW96 308 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 CALR3Q96L12 384 aaKnown RBP23.21■■□□□ 1.31
PLOD3-215ENST00000487563 PANX2Q96RD6 677 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 GBA3Q9H227 469 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 POT1Q9NUX5 634 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 IL17CQ9P0M4 197 aa23.21■■□□□ 1.31
PLOD3-215ENST00000487563 ZNF624Q9P2J8 865 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms