RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 DCXO43602 365 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 VPS26AO75436 327 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 NFKBIAP25963 317 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 DRD3P35462 400 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 PTSQ03393 145 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 CCDC15Q0P6D6 951 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 ASPHQ12797 758 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 CNTN1Q12860 1018 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 CHRNA6Q15825 494 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 LACTB2Q53H82 288 aaPredicted RBP14.05□□□□□ -0.16
CUX1-209ENST00000487284 ATG14Q6ZNE5 492 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 SYT13Q7L8C5 426 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 TTC7BQ86TV6 843 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 SPNS2Q8IVW8 549 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 AADATQ8N5Z0 425 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 KCNJ9Q92806 393 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 CLDN23Q96B33 292 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 TTC1Q99614 292 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 UNKQ9C0B0 810 aaKnown RBP14.05□□□□□ -0.16
CUX1-209ENST00000487284 DYRK4Q9NR20 520 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 NFKBIL1Q9UBC1 381 aaPredicted RBP14.05□□□□□ -0.16
CUX1-209ENST00000487284 SERGEFQ9UGK8 458 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 DCTN4Q9UJW0 460 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 NIPSNAP2O75323 286 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 DCTN3O75935 186 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 ADH1BP00325 375 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 PYGLP06737 847 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 DCNP07585 359 aaKnown RBP14.05□□□□□ -0.16
CUX1-209ENST00000487284 CD1DP15813 335 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 ZNF7P17097 686 aaPredicted RBP14.05□□□□□ -0.16
CUX1-209ENST00000487284 NDUFV2P19404 249 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 TFEBP19484 476 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 C5AR1P21730 350 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 XPAP23025 273 aaPredicted RBP14.05□□□□□ -0.16
CUX1-209ENST00000487284 ATP5F1P24539 256 aaPredicted RBP14.05□□□□□ -0.16
CUX1-209ENST00000487284 ACRV1P26436 265 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 CA5AP35218 305 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 SPINT3P49223 89 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 DNAJB13P59910 316 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 CWF19L1Q69YN2 538 aaKnown RBP14.05□□□□□ -0.16
CUX1-209ENST00000487284 PAQR3Q6TCH7 311 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 ERN2Q76MJ5 926 aaKnown RBP14.05□□□□□ -0.16
CUX1-209ENST00000487284 DPPA4Q7L190 304 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 ISCA2Q86U28 154 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 RBFAQ8N0V3 343 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 NXPE1Q8N323 547 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 PIWIL2Q8TC59 973 aaKnown RBP14.05□□□□□ -0.16
CUX1-209ENST00000487284 PPP4R1Q8TF05 950 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 CCDC126Q96EE4 140 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 MRGPRX1Q96LB2 322 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 GPR21Q99679 349 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 SIKE1Q9BRV8 207 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 TMEM120AQ9BXJ8 343 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 DERL2Q9GZP9 239 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 DRC3Q9H069 523 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 CHRDQ9H2X0 955 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 PCDH12Q9NPG4 1184 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 KCNK4Q9NYG8 393 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 RRP15Q9Y3B9 282 aaKnown RBP14.05□□□□□ -0.16
CUX1-209ENST00000487284 SIT1Q9Y3P8 196 aa14.05□□□□□ -0.16
CUX1-209ENST00000487284 A0A0G2JND7 137 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 A0A1W2PP55 124 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 SPINT1O43278 529 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 ZBTB14O43829 449 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 ATG13O75143 517 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 ADRB3P13945 408 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 GABRG2P18507 467 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 P2RY2P41231 377 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 SKIV2L2P42285 1042 aaKnown RBP14.04□□□□□ -0.16
CUX1-209ENST00000487284 DGKEP52429 567 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 ARFIP2P53365 341 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 DCDC1P59894 354 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 RALGDSQ12967 914 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 ARHGEF7Q14155 803 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 NUMA1Q14980 2115 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 GALNTL6Q49A17 601 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 PIP5KL1Q5T9C9 394 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 FBXL19Q6PCT2 694 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 FITM2Q8N6M3 262 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 GBP7Q8N8V2 638 aaPredicted RBP14.04□□□□□ -0.16
CUX1-209ENST00000487284 RHEBL1Q8TAI7 183 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 CD200R1Q8TD46 325 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 DTX3LQ8TDB6 740 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 PTERQ96BW5 349 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 SIPA1Q96FS4 1042 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 HDAC8Q9BY41 377 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 TFB2MQ9H5Q4 396 aaKnown RBP14.04□□□□□ -0.16
CUX1-209ENST00000487284 PKD2L2Q9NZM6 624 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 CRLS1Q9UJA2 301 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 ITM2BQ9Y287 266 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 DNAJC16Q9Y2G8 782 aa14.04□□□□□ -0.16
CUX1-209ENST00000487284 GOLGA8CPA6NN73 597 aa14.03□□□□□ -0.16
CUX1-209ENST00000487284 A8MT66 165 aa14.03□□□□□ -0.16
CUX1-209ENST00000487284 F8W8V4 182 aa14.03□□□□□ -0.16
CUX1-209ENST00000487284 HSPA4LO95757 839 aa14.03□□□□□ -0.16
CUX1-209ENST00000487284 DNTTP04053 509 aa14.03□□□□□ -0.16
CUX1-209ENST00000487284 C7P10643 843 aa14.03□□□□□ -0.16
CUX1-209ENST00000487284 UGT1A6P19224 532 aa14.03□□□□□ -0.16
CUX1-209ENST00000487284 UGT1A1P22309 533 aa14.03□□□□□ -0.16
CUX1-209ENST00000487284 UGT1A4P22310 534 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms