RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 FBXO8Q9NRD0 319 aa25.32■■□□□ 1.64
HLA-F-227ENST00000485513 PILRAQ9UKJ1 303 aa25.32■■□□□ 1.64
HLA-F-227ENST00000485513 FLNBO75369 2602 aaKnown RBP25.32■■□□□ 1.64
HLA-F-227ENST00000485513 SPTA1P02549 2419 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 LOC285095A0A1B0GVY8 99 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 PDZK1P1A8MUH7 402 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 SLC28A2O43868 658 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 VIPP01282 170 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 SFTPCP11686 197 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 MAGEA1P43355 309 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 TNNT3P45378 269 aaPredicted RBP25.31■■□□□ 1.64
HLA-F-227ENST00000485513 SEPT7Q16181 437 aaKnown RBP25.31■■□□□ 1.64
HLA-F-227ENST00000485513 ATP13A5Q4VNC0 1218 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 TFDP3Q5H9I0 405 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 KDELC1Q6UW63 502 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 TMEM26Q6ZUK4 368 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 ZC3H18Q86VM9 953 aaKnown RBP25.31■■□□□ 1.64
HLA-F-227ENST00000485513 ZNF547Q8IVP9 402 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 ZPBPQ9BS86 351 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 FAM117AQ9C073 453 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 GOLPH3Q9H4A6 298 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 TRABDQ9H4I3 376 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 KLHL8Q9P2G9 620 aaPredicted RBP25.31■■□□□ 1.64
HLA-F-227ENST00000485513 TMPRSS11EQ9UL52 423 aa25.31■■□□□ 1.64
HLA-F-227ENST00000485513 TLN1Q9Y490 2541 aaKnown RBP25.31■■□□□ 1.64
HLA-F-227ENST00000485513 MN1Q10571 1320 aaPredicted RBP25.31■■□□□ 1.64
HLA-F-227ENST00000485513 SETXQ7Z333 2677 aaKnown RBP25.3■■□□□ 1.64
HLA-F-227ENST00000485513 EPOP01588 193 aa25.3■■□□□ 1.64
HLA-F-227ENST00000485513 HMGCLP35914 325 aa25.3■■□□□ 1.64
HLA-F-227ENST00000485513 SLC19A1P41440 591 aa25.3■■□□□ 1.64
HLA-F-227ENST00000485513 ADCY2Q08462 1091 aa25.3■■□□□ 1.64
HLA-F-227ENST00000485513 NOMO1Q15155 1222 aa25.3■■□□□ 1.64
HLA-F-227ENST00000485513 GDAP1Q8TB36 358 aa25.3■■□□□ 1.64
HLA-F-227ENST00000485513 SPRY4Q9C004 299 aa25.3■■□□□ 1.64
HLA-F-227ENST00000485513 STARD5Q9NSY2 213 aa25.3■■□□□ 1.64
HLA-F-227ENST00000485513 ZNF624Q9P2J8 865 aaPredicted RBP25.3■■□□□ 1.64
HLA-F-227ENST00000485513 HEMK1Q9Y5R4 338 aaPredicted RBP25.3■■□□□ 1.64
HLA-F-227ENST00000485513 hCG_1818297A0A087WSY0 165 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 PRR19A6NJB7 356 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 ZRANB2O95218 330 aaKnown RBP eCLIP25.29■■□□□ 1.64
HLA-F-227ENST00000485513 SIRPB2Q5JXA9 342 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 PID1Q7Z2X4 250 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 PRICKLE2Q7Z3G6 844 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 KATNAL2Q8IYT4 538 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 RCOR2Q8IZ40 523 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 NLGN4XQ8N0W4 816 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 TTC30BQ8N4P2 665 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 SLC25A41Q8N5S1 370 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 NLGN4YQ8NFZ3 816 aaPredicted RBP25.29■■□□□ 1.64
HLA-F-227ENST00000485513 HAUS1Q96CS2 278 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 FCRL5Q96RD9 977 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 VAT1Q99536 393 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 APMAPQ9HDC9 416 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 OGFRQ9NZT2 677 aa25.29■■□□□ 1.64
HLA-F-227ENST00000485513 F5H423 210 aaPredicted RBP25.28■■□□□ 1.64
HLA-F-227ENST00000485513 UBXN7O94888 489 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 ANKRD34CP0C6C1 535 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 TYRP1P17643 537 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 AMD1P17707 334 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 VCLP18206 1134 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 ITGB6P18564 788 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 IDSP22304 550 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 RPL10P27635 214 aaKnown RBP25.28■■□□□ 1.64
HLA-F-227ENST00000485513 MAP4P27816 1152 aaKnown RBP25.28■■□□□ 1.64
HLA-F-227ENST00000485513 CHRNA4P43681 627 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 GFERP55789 205 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 TMEM115Q12893 351 aaPredicted RBP25.28■■□□□ 1.64
HLA-F-227ENST00000485513 GTF2H3Q13889 308 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 ZDHHC20Q5W0Z9 365 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 ABRAXAS1Q6UWZ7 409 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 TRAPPC5Q8IUR0 188 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 CCDC50Q8IVM0 306 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 ZNF567Q8N184 647 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 OXNAD1Q96HP4 312 aaPredicted RBP25.28■■□□□ 1.64
HLA-F-227ENST00000485513 MRGPRX2Q96LB1 330 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 C9orf72Q96LT7 481 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 TTC25Q96NG3 672 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 IL26Q9NPH9 171 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 POT1Q9NUX5 634 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 HACD3Q9P035 362 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 SLC30A1Q9Y6M5 507 aa25.28■■□□□ 1.64
HLA-F-227ENST00000485513 ASH1LQ9NR48 2969 aaKnown RBP25.28■■□□□ 1.64
HLA-F-227ENST00000485513 POLR1CO15160 346 aaPredicted RBP25.27■■□□□ 1.64
HLA-F-227ENST00000485513 CAPN5O15484 640 aaPredicted RBP25.27■■□□□ 1.64
HLA-F-227ENST00000485513 C9P02748 559 aa25.27■■□□□ 1.64
HLA-F-227ENST00000485513 BRAFP15056 766 aa25.27■■□□□ 1.64
HLA-F-227ENST00000485513 SPAM1P38567 509 aa25.27■■□□□ 1.64
HLA-F-227ENST00000485513 MARCKSL1P49006 195 aa25.27■■□□□ 1.64
HLA-F-227ENST00000485513 CLCA4Q14CN2 919 aa25.27■■□□□ 1.64
HLA-F-227ENST00000485513 AGAP9Q5VTM2 703 aa25.27■■□□□ 1.64
HLA-F-227ENST00000485513 WASH2PQ6VEQ5 465 aa25.27■■□□□ 1.64
HLA-F-227ENST00000485513 C11orf96Q7Z7L8 435 aa25.27■■□□□ 1.64
HLA-F-227ENST00000485513 TC2NQ8N9U0 490 aa25.27■■□□□ 1.64
HLA-F-227ENST00000485513 BRSK1Q8TDC3 778 aa25.27■■□□□ 1.64
HLA-F-227ENST00000485513 KIAA1143Q96AT1 154 aaPredicted RBP25.27■■□□□ 1.64
HLA-F-227ENST00000485513 RBM41Q96IZ5 413 aaKnown RBP25.27■■□□□ 1.64
HLA-F-227ENST00000485513 QKIQ96PU8 341 aaKnown RBP eCLIP25.27■■□□□ 1.64
HLA-F-227ENST00000485513 GPN2Q9H9Y4 310 aaPredicted RBP25.27■■□□□ 1.64
HLA-F-227ENST00000485513 WASH6PQ9NQA3 447 aa25.27■■□□□ 1.64
HLA-F-227ENST00000485513 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms