RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 EML2O95834 649 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 GAS8O95995 478 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 F3P13726 295 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 SLC2A4P14672 509 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 TPSB2P20231 275 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 ITGALP20701 1170 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 COILP38432 576 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-225ENST00000483506 MAGEA6P43360 314 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 GPR3P46089 330 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 FNTAP49354 379 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 PDX1P52945 283 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 CTSCP53634 463 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 CDK16Q00536 496 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 B4GALNT1Q00973 533 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 DMPKQ09013 629 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 RTP5Q14D33 572 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 TPSAB1Q15661 275 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 ISXQ2M1V0 245 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 IYDQ6PHW0 289 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 PPP1R21Q6ZMI0 780 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 CCNJLQ8IV13 435 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 NXPE1Q8N323 547 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 DNAAF3Q8N9W5 541 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 SLC37A2Q8TED4 501 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 PEX13Q92968 403 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 CDKN2AIPNLQ96HQ2 116 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 ZNF514Q96K75 400 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-225ENST00000483506 AP1M1Q9BXS5 423 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 LRRN3Q9H3W5 708 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 KLC4Q9NSK0 619 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 SMARCAL1Q9NZC9 954 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 DNMT3AQ9Y6K1 912 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-225ENST00000483506 UNC13CQ8NB66 2214 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 IGLV3-16A0A075B6K0 115 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 KIR2DS5A0A0G2JLQ3 304 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 A0A0G2JNG1 304 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 OR5K4A6NMS3 321 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 D6RAR5 112 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 KIR2DS3K7RE56 304 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 ZNF185O15231 689 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 CASC3O15234 703 aaKnown RBP17.73■□□□□ 0.43
HDAC6-225ENST00000483506 PHF2O75151 1096 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 CSO75390 466 aaKnown RBP17.73■□□□□ 0.43
HDAC6-225ENST00000483506 ADRA1DP25100 572 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 MC4RP32245 332 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 GNG11P61952 73 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 CCL7P80098 99 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 BASP1P80723 227 aaKnown RBP17.73■□□□□ 0.43
HDAC6-225ENST00000483506 TMPRSS15P98073 1019 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 ACVR1Q04771 509 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 SEPT6Q14141 434 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 SPIDRQ14159 915 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 KIR2DS5Q14953 304 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 CLPPQ16740 277 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-225ENST00000483506 INSCQ1MX18 579 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 SKIDA1Q1XH10 827 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-225ENST00000483506 CCDC137Q6PK04 289 aaKnown RBP17.73■□□□□ 0.43
HDAC6-225ENST00000483506 WASH2PQ6VEQ5 465 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 NLRP9Q7RTR0 991 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 TRAPPC5Q8IUR0 188 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 OR13J1Q8NGT2 312 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 HEXDCQ8WVB3 486 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 NXPE2Q96DL1 559 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 TTC25Q96NG3 672 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 SARS2Q9NP81 518 aaKnown RBP17.73■□□□□ 0.43
HDAC6-225ENST00000483506 WASH6PQ9NQA3 447 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.73■□□□□ 0.43
HDAC6-225ENST00000483506 DMXL2Q8TDJ6 3036 aa17.73■□□□□ 0.43
HDAC6-225ENST00000483506 APC2O95996 2303 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 GOLGA6L10A0A0M3HER8 536 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 RHPN2P1A8MT19 583 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 AP3B1O00203 1094 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 CCL22O00626 93 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 PPM1DO15297 605 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 RPLP0P05388 317 aaKnown RBP17.72■□□□□ 0.43
HDAC6-225ENST00000483506 MSH3P20585 1137 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 BCL7AQ4VC05 210 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 AGAP9Q5VTM2 703 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 ABRAXAS1Q6UWZ7 409 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 AVL9Q8NBF6 648 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 LINC00615Q96LM1 132 aaPredicted RBP17.72■□□□□ 0.43
HDAC6-225ENST00000483506 GFM1Q96RP9 751 aaKnown RBP17.72■□□□□ 0.43
HDAC6-225ENST00000483506 CRLS1Q9UJA2 301 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 PCDHB1Q9Y5F3 818 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 ENTPD2Q9Y5L3 495 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 SLC30A1Q9Y6M5 507 aa17.72■□□□□ 0.43
HDAC6-225ENST00000483506 ANKRD11Q6UB99 2663 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-225ENST00000483506 KLHL33A6NCF5 533 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 ZW10O43264 779 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 B4GAT1O43505 415 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 SGTAO43765 313 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 KRT14P02533 472 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 VCLP18206 1134 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 ACRV1P26436 265 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 AKT1P31749 480 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 ARSDP51689 593 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 UBE2IP63279 158 aaKnown RBP17.71■□□□□ 0.43
HDAC6-225ENST00000483506 CACNG1Q06432 222 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 SQSTM1Q13501 440 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms