RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 DDHD1Q8NEL9 900 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 FAM174AQ8TBP5 190 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 ATXN7L3BQ96GX2 97 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 COPS8Q99627 209 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 FAM167BQ9BTA0 163 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 PHACTR1Q9C0D0 580 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 GAREM1Q9H706 876 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 CAPN10Q9HC96 672 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 LRRC4CQ9HCJ2 640 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 PARD6AQ9NPB6 346 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 TM7SF3Q9NS93 570 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 SMOXQ9NWM0 555 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 ZDHHC3Q9NYG2 299 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 APOBEC3BQ9UH17 382 aaKnown RBP13.08□□□□□ -0.32
HDAC1-208ENST00000482310 KLF15Q9UIH9 416 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 PRSS21Q9Y6M0 314 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 CABIN1Q9Y6J0 2220 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 OTOGLQ3ZCN5 2332 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 TRBV5-4A0A0C4DH59 114 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 TCRBV9S1A1TA0A576 114 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 CFAP99D6REC4 459 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 CDK14O94921 469 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 FUCA1P04066 466 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 CEACAM5P06731 702 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 CELA2BP08218 269 aaPredicted RBP13.07□□□□□ -0.32
HDAC1-208ENST00000482310 SYPP08247 313 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 RALBP11234 206 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 CTSKP43235 329 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 ID4P47928 161 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 CTSCP53634 463 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 PMS2P54278 862 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 B4GALNT1Q00973 533 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 PPARDQ03181 441 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 OVGP1Q12889 678 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 C1orf61Q13536 156 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 HLA-BQ31612 363 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 AASDHQ4L235 1098 aaPredicted RBP13.07□□□□□ -0.32
HDAC1-208ENST00000482310 ZNF789Q5FWF6 425 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 AARS2Q5JTZ9 985 aaKnown RBP13.07□□□□□ -0.32
HDAC1-208ENST00000482310 PLA2G2CQ5R387 149 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 SDCCAG8Q86SQ7 713 aaPredicted RBP13.07□□□□□ -0.32
HDAC1-208ENST00000482310 GALNT13Q8IUC8 556 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 CTAGE3PQ8IX95 158 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 CLDN19Q8N6F1 224 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 RASGEF1AQ8N9B8 481 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 FBF1Q8TES7 1133 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 UBLCP1Q8WVY7 318 aaPredicted RBP13.07□□□□□ -0.32
HDAC1-208ENST00000482310 RUBCNQ92622 972 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 FAM136AQ96C01 138 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 SGF29Q96ES7 293 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 ZCCHC2Q9C0B9 1178 aaKnown RBP13.07□□□□□ -0.32
HDAC1-208ENST00000482310 TSPYL1Q9H0U9 437 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 TRIM39Q9HCM9 518 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 SMYD2Q9NRG4 433 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 GPR27Q9NS67 375 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 SEMA4GQ9NTN9 838 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 ZFATQ9P243 1243 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 DNAJC16Q9Y2G8 782 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 CRYL1Q9Y2S2 319 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 PLEKHM1Q9Y4G2 1056 aa13.07□□□□□ -0.32
HDAC1-208ENST00000482310 MED19A0JLT2 244 aaPredicted RBP13.06□□□□□ -0.32
HDAC1-208ENST00000482310 LNP1A1A4G5 178 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 CXorf49A8MYA2 514 aaPredicted RBP13.06□□□□□ -0.32
HDAC1-208ENST00000482310 ARHGAP33O14559 1287 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 TOR1BO14657 336 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 TNFP01375 233 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 HOXC4P09017 264 aaPredicted RBP13.06□□□□□ -0.32
HDAC1-208ENST00000482310 ACP5P13686 325 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 CTSEP14091 401 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 FMO4P31512 558 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 TTPAP49638 278 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 FOXK2Q01167 660 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 MGAT5Q09328 741 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 SLMAPQ14BN4 828 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 UAP1Q16222 522 aaPredicted RBP13.06□□□□□ -0.32
HDAC1-208ENST00000482310 INSCQ1MX18 579 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 PRRT3Q5FWE3 981 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 ARMC3Q5W041 872 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 TMEM220Q6QAJ8 160 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 CHST15Q7LFX5 561 aaPredicted RBP13.06□□□□□ -0.32
HDAC1-208ENST00000482310 GATAD2AQ86YP4 633 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 DCP2Q8IU60 420 aaKnown RBP13.06□□□□□ -0.32
HDAC1-208ENST00000482310 CILP2Q8IUL8 1156 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 MINDY1Q8N5J2 469 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 CCL4L1Q8NHW4 92 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 CALML6Q8TD86 181 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 LMX1AQ8TE12 382 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 OR2M4Q96R27 311 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 TTC1Q99614 292 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 C19orf43Q9BQ61 176 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 EDEM2Q9BV94 578 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 SLC13A1Q9BZW2 595 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 CLPBQ9H078 707 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 TMEM168Q9H0V1 697 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 RXFP3Q9NSD7 469 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 TSR3Q9UJK0 312 aaKnown RBP13.06□□□□□ -0.32
HDAC1-208ENST00000482310 FBXO5Q9UKT4 447 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 KCNK6Q9Y257 313 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 SLC17A4Q9Y2C5 497 aa13.06□□□□□ -0.32
HDAC1-208ENST00000482310 ASCC3Q8N3C0 2202 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms