RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TRIM10Q9UDY6 481 aa18.29■□□□□ 0.52
CLK1-211ENST00000481641 OR5K4A6NMS3 321 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 PDZK1P1A8MUH7 402 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 B8ZZF3 427 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 KMOO15229 486 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 GPR39O43194 453 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 UGT1A9O60656 530 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 LCA5LO95447 670 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 TYRP1P17643 537 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 UGT1A6P19224 532 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 UGT1A1P22309 533 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 UGT1A4P22310 534 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 RPL10P27635 214 aaKnown RBP18.28■□□□□ 0.52
CLK1-211ENST00000481641 ATP1A2P50993 1020 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 EPHA4P54764 986 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 GFERP55789 205 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 TBR1Q16650 682 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 DCAF12Q5T6F0 453 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 SARM1Q6SZW1 724 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 RCOR2Q8IZ40 523 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 IL22RA1Q8N6P7 574 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 ZSCAN1Q8NBB4 408 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 IPMKQ8NFU5 416 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 GDAP1Q8TB36 358 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 QKIQ96PU8 341 aaKnown RBP eCLIP18.28■□□□□ 0.52
CLK1-211ENST00000481641 ARHGAP9Q9BRR9 750 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.28■□□□□ 0.52
CLK1-211ENST00000481641 UGT1A7Q9HAW7 530 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 UGT1A10Q9HAW8 530 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 UGT1A8Q9HAW9 530 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 OGFRQ9NZT2 677 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 SLC30A1Q9Y6M5 507 aa18.28■□□□□ 0.52
CLK1-211ENST00000481641 PRR19A6NJB7 356 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 GPR89AB7ZAQ6 455 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 VEGFDO43915 354 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 RAD1O60671 282 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 VIPP01282 170 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 FAM87AP0C7U9 286 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 GPR89BP0CG08 455 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 LIFP15018 202 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 BRAFP15056 766 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 XRCC1P18887 633 aaPredicted RBP18.27■□□□□ 0.52
CLK1-211ENST00000481641 HMGCLP35914 325 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 DRG2P55039 364 aaKnown RBP18.27■□□□□ 0.52
CLK1-211ENST00000481641 MC2RQ01718 297 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 TMEM26Q6ZUK4 368 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 C11orf96Q7Z7L8 435 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 TRIM48Q8IWZ4 208 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 CACNA2D3Q8IZS8 1091 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 BLOC1S5Q8TDH9 187 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 RTP4Q96DX8 246 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 VPS35Q96QK1 796 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 FCRL5Q96RD9 977 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 ASPSCR1Q9BZE9 553 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 IL26Q9NPH9 171 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 BOD1L1Q8NFC6 3051 aa18.27■□□□□ 0.52
CLK1-211ENST00000481641 RCCD1A6NED2 376 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 LILRA5A6NI73 299 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 OR52A4PA6NMU1 304 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 MTSS1O43312 755 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 ITGB2P05107 769 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 RBL1P28749 1068 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 TMEM115Q12893 351 aaPredicted RBP18.26■□□□□ 0.51
CLK1-211ENST00000481641 NFATC3Q12968 1075 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 PTPRCAPQ14761 206 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 SLC1A5Q15758 541 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 CHRNA6Q15825 494 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 FAM151BQ6UXP7 276 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 TRAPPC5Q8IUR0 188 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 SRPK1Q96SB4 655 aaKnown RBP18.26■□□□□ 0.51
CLK1-211ENST00000481641 TIMM29Q9BSF4 260 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 SLC12A9Q9BXP2 914 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 IL17CQ9P0M4 197 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 RSPH14Q9UHP6 348 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 WDR37Q9Y2I8 494 aa18.26■□□□□ 0.51
CLK1-211ENST00000481641 TENM4Q6N022 2769 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 H7C0C1 242 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 J3QKU1 62 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 UBXN7O94888 489 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 AGTP01019 485 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 EPOP01588 193 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 ATP5OP48047 213 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 RAB15P59190 212 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 NFKB2Q00653 900 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 OLIG2Q13516 323 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 CLCA4Q14CN2 919 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 SPA17Q15506 151 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 C11orf63Q6NUN7 778 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 BBS12Q6ZW61 710 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 TIPARPQ7Z3E1 657 aaKnown RBP18.25■□□□□ 0.51
CLK1-211ENST00000481641 GLT6D1Q7Z4J2 308 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 DAAM2Q86T65 1068 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 RBM41Q96IZ5 413 aaKnown RBP18.25■□□□□ 0.51
CLK1-211ENST00000481641 TGM7Q96PF1 710 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 FAM118BQ9BPY3 351 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 GORASP1Q9BQQ3 440 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 SPRY4Q9C004 299 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 TRABDQ9H4I3 376 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 PILRAQ9UKJ1 303 aa18.25■□□□□ 0.51
CLK1-211ENST00000481641 MN1Q10571 1320 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms