RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ACSL1P33121 698 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 CBSP35520 551 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 CDKN1CP49918 316 aaPredicted RBP10.05□□□□□ -0.8
USP39-215ENST00000481409 SEMG2Q02383 582 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 TMEM115Q12893 351 aaPredicted RBP10.05□□□□□ -0.8
USP39-215ENST00000481409 FAM83EQ2M2I3 478 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 WSCD2Q2TBF2 565 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 CCDC153Q494R4 210 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 BCL7AQ4VC05 210 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 AGAP9Q5VTM2 703 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 SEL1L3Q68CR1 1132 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 KLC3Q6P597 504 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 KDM7AQ6ZMT4 941 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 RAPH1Q70E73 1250 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 TBC1D1Q86TI0 1168 aaPredicted RBP10.05□□□□□ -0.8
USP39-215ENST00000481409 CACUL1Q86Y37 369 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 DCP2Q8IU60 420 aaKnown RBP10.05□□□□□ -0.8
USP39-215ENST00000481409 HOMEZQ8IX15 550 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 BANPQ8N9N5 519 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 GDAP1Q8TB36 358 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 TOE1Q96GM8 510 aaKnown RBP10.05□□□□□ -0.8
USP39-215ENST00000481409 PDLIM5Q96HC4 596 aaKnown RBP10.05□□□□□ -0.8
USP39-215ENST00000481409 LINC00615Q96LM1 132 aaPredicted RBP10.05□□□□□ -0.8
USP39-215ENST00000481409 HHIPQ96QV1 700 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 SLC6A17Q9H1V8 727 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 WDR26Q9H7D7 661 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 GPAMQ9HCL2 828 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 SPATS2LQ9NUQ6 558 aaKnown RBP10.05□□□□□ -0.8
USP39-215ENST00000481409 NKIRAS1Q9NYS0 192 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 SLC17A6Q9P2U8 582 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 METRNQ9UJH8 293 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 FBXO4Q9UKT5 387 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 FNDC3AQ9Y2H6 1198 aaKnown RBP10.05□□□□□ -0.8
USP39-215ENST00000481409 DHRS7Q9Y394 339 aa10.05□□□□□ -0.8
USP39-215ENST00000481409 OAS3Q9Y6K5 1087 aaKnown RBP10.05□□□□□ -0.8
USP39-215ENST00000481409 A0A1W2PPM1 405 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 H3BQF6 201 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 CACNB4O00305 520 aaPredicted RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 TNFRSF10CO14798 259 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 LAMTOR5O43504 91 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 TYROBPO43914 113 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 CDK14O94921 469 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 DCNP07585 359 aaKnown RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 LTA4HP09960 611 aaKnown RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 PYGBP11216 843 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 ENO3P13929 434 aaPredicted RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 CHRM3P20309 590 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 OAS2P29728 719 aaKnown RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 FMO4P31512 558 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 PRLHRP49683 370 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 RGS4P49798 205 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 NUBP1P53384 320 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 TAS2R39P59534 338 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 KIAA1024LP59773 190 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 ATP6V0D1P61421 351 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 CDK3Q00526 305 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 OVGP1Q12889 678 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 PDAP1Q13442 181 aaKnown RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 BMPR2Q13873 1038 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 PDE1CQ14123 709 aaPredicted RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 PTK2BQ14289 1009 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 IRF4Q15306 451 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 SEPT7Q16181 437 aaKnown RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 ZNF789Q5FWF6 425 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 CTSL3PQ5NE16 218 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 PLEKHS1Q5SXH7 462 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 KCTD16Q68DU8 428 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 ZNF549Q6P9A3 640 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 RFLNAQ6ZTI6 216 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 CLEC14AQ86T13 490 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 LDB1Q86U70 411 aaPredicted RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 WDR5BQ86VZ2 330 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 RDH11Q8TC12 318 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 INPP5DQ92835 1189 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 SERAC1Q96JX3 654 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 UBXN10Q96LJ8 280 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 KLF6Q99612 283 aaPredicted RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 FAM96AQ9H5X1 160 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 NMRAL1Q9HBL8 299 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 SPATA6Q9NWH7 488 aaPredicted RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 TRMT6Q9UJA5 497 aaKnown RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 TMPRSS11EQ9UL52 423 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 CNOT6Q9ULM6 557 aaKnown RBP10.04□□□□□ -0.8
USP39-215ENST00000481409 CYP8B1Q9UNU6 501 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 COQ6Q9Y2Z9 468 aa10.04□□□□□ -0.8
USP39-215ENST00000481409 A0A1W2PPC4 97 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 METTL12A8MUP2 240 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 CHUKO15111 745 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 OR1I1O60431 355 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 KLHL2O95198 593 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 WISP3O95389 354 aaPredicted RBP10.03□□□□□ -0.8
USP39-215ENST00000481409 RBP1P09455 135 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 SLC35E2BP0CK96 405 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 ZNF37AP17032 561 aaPredicted RBP10.03□□□□□ -0.8
USP39-215ENST00000481409 DGKAP23743 735 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 HTR1BP28222 390 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 CNR2P34972 360 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 RABIFP47224 123 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 IL2P60568 153 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 PFN3P60673 137 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms