RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 OTX2P32243 289 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 UBE2IP63279 158 aaKnown RBP10.97□□□□□ -0.65
CCDC18-208ENST00000479653 APBA1Q02410 837 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 NSUN2Q08J23 767 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCDC18-208ENST00000479653 MYBPC3Q14896 1274 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 CCDC14Q49A88 953 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 VWA3BQ502W6 1294 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 HSP90AA4PQ58FG1 418 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 LCN10Q6JVE6 187 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 TSPAN33Q86UF1 283 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 PHYKPLQ8IUZ5 450 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 TRIM59Q8IWR1 403 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 UMODL1-AS1Q8N2C9 162 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 GALNT16Q8N428 558 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 CLEC1AQ8NC01 280 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 EXD1Q8NHP7 514 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 RXFP2Q8WXD0 754 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 CELF6Q96J87 481 aaKnown RBP10.97□□□□□ -0.65
CCDC18-208ENST00000479653 NSMCE3Q96MG7 304 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 AGAP2Q99490 1192 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 XPO4Q9C0E2 1151 aaKnown RBP10.97□□□□□ -0.65
CCDC18-208ENST00000479653 ZNF552Q9H707 407 aaPredicted RBP10.97□□□□□ -0.65
CCDC18-208ENST00000479653 CATSPERBQ9H7T0 1116 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 UCK1Q9HA47 277 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 ZBTB20Q9HC78 741 aaPredicted RBP10.97□□□□□ -0.65
CCDC18-208ENST00000479653 RTN4Q9NQC3 1192 aaKnown RBP10.97□□□□□ -0.65
CCDC18-208ENST00000479653 METTL5Q9NRN9 209 aaKnown RBP10.97□□□□□ -0.65
CCDC18-208ENST00000479653 TAB2Q9NYJ8 693 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 PCSK5Q92824 1860 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 DOCK4Q8N1I0 1966 aa10.97□□□□□ -0.65
CCDC18-208ENST00000479653 MAP1AP78559 2803 aaPredicted RBP10.97□□□□□ -0.65
CCDC18-208ENST00000479653 NPIPB15A6NHN6 443 aaPredicted RBP10.96□□□□□ -0.65
CCDC18-208ENST00000479653 WASH4PA8MWX3 477 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 PSMD11O00231 422 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 MEN1O00255 615 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 KLHL41O60662 606 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 FAM155BO75949 473 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 IPO13O94829 963 aaKnown RBP10.96□□□□□ -0.65
CCDC18-208ENST00000479653 CPP00450 1065 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 TPM1P09493 284 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 RAB40ALP0C0E4 278 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 PNMA6AP0CW24 399 aaPredicted RBP10.96□□□□□ -0.65
CCDC18-208ENST00000479653 XRCC1P18887 633 aaPredicted RBP10.96□□□□□ -0.65
CCDC18-208ENST00000479653 SLC9A1P19634 815 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 CAPZBP47756 277 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 PAPOLAP51003 745 aaKnown RBP10.96□□□□□ -0.65
CCDC18-208ENST00000479653 UBXN1Q04323 297 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 CDC16Q13042 620 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 NR1I3Q14994 352 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 TRIM65Q6PJ69 517 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 CERS6Q6ZMG9 384 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 TECPR1Q7Z6L1 1165 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 SLFN11Q7Z7L1 901 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 RAB43Q86YS6 212 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 SPNS2Q8IVW8 549 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 SLC38A9Q8NBW4 561 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 RELTQ969Z4 430 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 CLIP3Q96DZ5 547 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 ZNF514Q96K75 400 aaPredicted RBP10.96□□□□□ -0.65
CCDC18-208ENST00000479653 FER1L6-AS2Q96M78 137 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 NLNQ9BYT8 704 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 VPS16Q9H269 839 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 NDST4Q9H3R1 872 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 KCND1Q9NSA2 647 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 KLC4Q9NSK0 619 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 SCHIP1Q9P0W5 487 aaPredicted RBP10.96□□□□□ -0.65
CCDC18-208ENST00000479653 IMPACTQ9P2X3 320 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 SIK3Q9Y2K2 1263 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 NEU2Q9Y3R4 380 aa10.96□□□□□ -0.65
CCDC18-208ENST00000479653 TRGV8A0A0C4DH27 118 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.95□□□□□ -0.66
CCDC18-208ENST00000479653 A0A1W2PQ67 120 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 GTPBP10A4D1E9 387 aaKnown RBP10.95□□□□□ -0.66
CCDC18-208ENST00000479653 KCNN4O15554 427 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 JRKO75564 520 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 CTPS1P17812 591 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 SLC19A1P41440 591 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 ART1P52961 327 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 GSDMDP57764 484 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 AP1S1P61966 158 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 PPP1CAP62136 330 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 MMRN1Q13201 1228 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 TRIM14Q14142 442 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 SEPT7Q16181 437 aaKnown RBP10.95□□□□□ -0.66
CCDC18-208ENST00000479653 HIF1AQ16665 826 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 PRAMEF17Q5VTA0 474 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 TAF3Q5VWG9 929 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 SCYL2Q6P3W7 929 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 ARCQ7LC44 396 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 APTXQ7Z2E3 356 aaKnown RBP10.95□□□□□ -0.66
CCDC18-208ENST00000479653 ZNF808Q8N4W9 903 aaPredicted RBP10.95□□□□□ -0.66
CCDC18-208ENST00000479653 MSANTD4Q8NCY6 345 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 DNAJB14Q8TBM8 379 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 FAM172AQ8WUF8 416 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 CHTF18Q8WVB6 975 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 CPA5Q8WXQ8 436 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 UBXN4Q92575 508 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 SCRN2Q96FV2 425 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 COX14Q96I36 57 aa10.95□□□□□ -0.66
CCDC18-208ENST00000479653 SLC41A2Q96JW4 573 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms