RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 HNRNPH3P31942 346 aaKnown RBP17.03■□□□□ 0.32
HMGN1-212ENST00000479586 EPHB1P54762 984 aa17.03■□□□□ 0.32
HMGN1-212ENST00000479586 GPS2Q13227 327 aa17.03■□□□□ 0.32
HMGN1-212ENST00000479586 IHHQ14623 411 aa17.03■□□□□ 0.32
HMGN1-212ENST00000479586 CAMK4Q16566 473 aa17.03■□□□□ 0.32
HMGN1-212ENST00000479586 SMAD5Q99717 465 aaKnown RBP17.03■□□□□ 0.32
HMGN1-212ENST00000479586 OR2AG1Q9H205 316 aa17.03■□□□□ 0.32
HMGN1-212ENST00000479586 SLC40A1Q9NP59 571 aa17.03■□□□□ 0.32
HMGN1-212ENST00000479586 NT5MQ9NPB1 228 aa17.03■□□□□ 0.32
HMGN1-212ENST00000479586 EPHA6Q9UF33 1036 aa17.03■□□□□ 0.32
HMGN1-212ENST00000479586 ENTPD4Q9Y227 616 aa17.03■□□□□ 0.32
HMGN1-212ENST00000479586 DNAJC16Q9Y2G8 782 aa17.03■□□□□ 0.32
HMGN1-212ENST00000479586 PCSK5Q92824 1860 aa17.03■□□□□ 0.32
HMGN1-212ENST00000479586 OR52A4PA6NMU1 304 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 PDZK1P1A8MUH7 402 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 CPNE3O75131 537 aaKnown RBP17.02■□□□□ 0.32
HMGN1-212ENST00000479586 BRAFP15056 766 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 PDE1BQ01064 536 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 ELOAQ14241 798 aaKnown RBP17.02■□□□□ 0.32
HMGN1-212ENST00000479586 TDRD12Q587J7 1177 aaKnown RBP17.02■□□□□ 0.32
HMGN1-212ENST00000479586 MARC1Q5VT66 337 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 IZUMO3Q5VZ72 239 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 LCN10Q6JVE6 187 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 ZNF517Q6ZMY9 492 aaPredicted RBP17.02■□□□□ 0.32
HMGN1-212ENST00000479586 ZC3H18Q86VM9 953 aaKnown RBP17.02■□□□□ 0.32
HMGN1-212ENST00000479586 ENDOVQ8N8Q3 282 aaKnown RBP17.02■□□□□ 0.32
HMGN1-212ENST00000479586 MLKLQ8NB16 471 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 GLIS1Q8NBF1 620 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 ZNF514Q96K75 400 aaPredicted RBP17.02■□□□□ 0.32
HMGN1-212ENST00000479586 MLPHQ9BV36 600 aaPredicted RBP17.02■□□□□ 0.32
HMGN1-212ENST00000479586 CHST8Q9H2A9 424 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 WASH6PQ9NQA3 447 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 FGF21Q9NSA1 209 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 POT1Q9NUX5 634 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 SEMA5BQ9P283 1151 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 SNX7Q9UNH6 387 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 CHKBQ9Y259 395 aa17.02■□□□□ 0.32
HMGN1-212ENST00000479586 TACC2O95359 2948 aa17.02■□□□□ 0.31
HMGN1-212ENST00000479586 MTORP42345 2549 aa17.02■□□□□ 0.31
HMGN1-212ENST00000479586 CCDC168Q8NDH2 2452 aa17.02■□□□□ 0.31
HMGN1-212ENST00000479586 F5H423 210 aaPredicted RBP17.01■□□□□ 0.31
HMGN1-212ENST00000479586 MTA2O94776 668 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 RPL10P27635 214 aaKnown RBP17.01■□□□□ 0.31
HMGN1-212ENST00000479586 HCAR3P49019 387 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 SPINT3P49223 89 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 ACY1Q03154 408 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 INSCQ1MX18 579 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 MCEMP1Q8IX19 187 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 MCOLN2Q8IZK6 566 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 ATPAF2Q8N5M1 289 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.01■□□□□ 0.31
HMGN1-212ENST00000479586 SLC38A9Q8NBW4 561 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 UBXN4Q92575 508 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 RAB33BQ9H082 229 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 FAM83DQ9H4H8 585 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 TAB2Q9NYJ8 693 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 DTLQ9NZJ0 730 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 B3GNT3Q9Y2A9 372 aa17.01■□□□□ 0.31
HMGN1-212ENST00000479586 SCRG1O75711 98 aa17■□□□□ 0.31
HMGN1-212ENST00000479586 AMPD1P23109 780 aa17■□□□□ 0.31
HMGN1-212ENST00000479586 MIPP30301 263 aa17■□□□□ 0.31
HMGN1-212ENST00000479586 VAV2P52735 878 aa17■□□□□ 0.31
HMGN1-212ENST00000479586 ITKQ08881 620 aa17■□□□□ 0.31
HMGN1-212ENST00000479586 BPHLQ86WA6 291 aaPredicted RBP17■□□□□ 0.31
HMGN1-212ENST00000479586 TMEM126BQ8IUX1 230 aa17■□□□□ 0.31
HMGN1-212ENST00000479586 NSMCE1Q8WV22 266 aa17■□□□□ 0.31
HMGN1-212ENST00000479586 CXorf40BQ96DE9 158 aa17■□□□□ 0.31
HMGN1-212ENST00000479586 MAP3K3Q99759 626 aa17■□□□□ 0.31
HMGN1-212ENST00000479586 SAMSN1Q9NSI8 373 aaKnown RBP17■□□□□ 0.31
HMGN1-212ENST00000479586 DNPEPQ9ULA0 475 aa17■□□□□ 0.31
HMGN1-212ENST00000479586 NTNG1Q9Y2I2 539 aa17■□□□□ 0.31
HMGN1-212ENST00000479586 DCHS2Q6V1P9 2916 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 C1orf232A0A0U1RR37 186 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 ATMINO43313 823 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-212ENST00000479586 PRPSAP2O60256 369 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 PRLP01236 227 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 JCHAINP01591 159 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 ZNF7P17097 686 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-212ENST00000479586 IL4RP24394 825 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 DRG2P55039 364 aaKnown RBP16.99■□□□□ 0.31
HMGN1-212ENST00000479586 CDH6P55285 790 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 DSC2Q02487 901 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 MAMLD1Q13495 774 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 ATP1A4Q13733 1029 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 SYCP1Q15431 976 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 CRB2Q5IJ48 1285 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 VWA5B1Q5TIE3 1220 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 PRAMEF17Q5VTA0 474 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 SP5Q6BEB4 398 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-212ENST00000479586 TMCO3Q6UWJ1 677 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 ABRAXAS1Q6UWZ7 409 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 MED25Q71SY5 747 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 ADGRG6Q86SQ4 1221 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 RAVER1Q8IY67 606 aaKnown RBP16.99■□□□□ 0.31
HMGN1-212ENST00000479586 ZBTB2Q8N680 514 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 TMEM102Q8N9M5 508 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-212ENST00000479586 LPCAT1Q8NF37 534 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 INPP5DQ92835 1189 aa16.99■□□□□ 0.31
HMGN1-212ENST00000479586 TDRD1Q9BXT4 1180 aaKnown RBP16.99■□□□□ 0.31
HMGN1-212ENST00000479586 TRIM7Q9C029 511 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms