RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 DNTTIP2Q5QJE6 756 aaKnown RBP4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 DCAF12L2Q5VW00 463 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 PMS2CLQ68D20 193 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 CES5AQ6NT32 575 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 PRSS57Q6UWY2 283 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 PRPF39Q86UA1 669 aaKnown RBP4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 HACE1Q8IYU2 909 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 TAGAPQ8N103 731 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 C1orf131Q8NDD1 294 aaKnown RBP4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 SEPT5Q99719 369 aaPredicted RBP4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 NCAPGQ9BPX3 1015 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 TMEM47Q9BQJ4 181 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 CENPOQ9BU64 300 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 MXD3Q9BW11 206 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 CYSLTR2Q9NS75 346 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 FBXL17Q9UF56 701 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 CEPT1Q9Y6K0 416 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 AFF2P51816 1311 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 NINLQ9Y2I6 1382 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 BCL9LQ86UU0 1499 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 DOT1LQ8TEK3 1739 aa4.09□□□□□ -1.76
CDC42BPA-212ENST00000478573 KIF26BQ2KJY2 2108 aa4.09□□□□□ -1.76
CDC42BPA-212ENST00000478573 TMEM202A6NGA9 273 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 BTBD18B2RXH4 712 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 WNT9BO14905 357 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 BTAF1O14981 1849 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 DAB1O75553 588 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 ERAL1O75616 437 aaKnown RBP4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 CPDO75976 1380 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 BEST1O76090 585 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 ADRB2P07550 413 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 ITGB4P16144 1822 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 TMEM11P17152 192 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 CD58P19256 250 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 GPTP24298 496 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 SNX16P57768 344 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 IFI35P80217 286 aaPredicted RBP4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 ABATP80404 500 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 TFAP4Q01664 338 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 ITGADQ13349 1161 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 ARHGEF6Q15052 776 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 FBXO46Q6PJ61 603 aaPredicted RBP4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 GSG1LQ6UXU4 331 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 CFAP77Q6ZQR2 320 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 SEPT14Q6ZU15 432 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 SSH2Q76I76 1423 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 TMPRSS12Q86WS5 348 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 FOXP4Q8IVH2 680 aaPredicted RBP4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 C17orf53Q8N3J3 647 aaPredicted RBP4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 ZBTB2Q8N680 514 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 ADAMTS14Q8WXS8 1223 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 KAT6BQ8WYB5 2073 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 PPP1R13BQ96KQ4 1090 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 OR2A14Q96R47 310 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 TUBGCP6Q96RT7 1819 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 TEX12Q9BXU0 123 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 IFIH1Q9BYX4 1025 aaKnown RBP4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 CATSPERBQ9H7T0 1116 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 MKKSQ9NPJ1 570 aaPredicted RBP4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 CD163L1Q9NR16 1453 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 OGFRQ9NZT2 677 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 RPS6KA6Q9UK32 745 aa4.08□□□□□ -1.76
CDC42BPA-212ENST00000478573 TAF1LQ8IZX4 1826 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 LY75O60449 1722 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 COL24A1Q17RW2 1714 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 CPSF1Q10570 1443 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 EDC4Q6P2E9 1401 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 EVC2Q86UK5 1308 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 DENND3A2RUS2 1198 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 P4HA2O15460 535 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 LDB2O43679 373 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 ENTPD3O75355 529 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 RGS11O94810 467 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 CSPG5O95196 566 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 SRPRAP08240 638 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 CLTBP09497 229 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 GCH1P30793 250 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 NNMTP40261 264 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 EIF2DP41214 584 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 CAMPP49913 170 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 PMS2P54278 862 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 RAD23BP54727 409 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 ERVFC1-1P60608 527 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 ZP1P60852 638 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 DSC1Q08554 894 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 CDONQ4KMG0 1287 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 FSCBQ5H9T9 825 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 OTUD3Q5T2D3 398 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 KIAA0930Q6ICG6 404 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 KRBA2Q6ZNG9 492 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 CREB3L2Q70SY1 520 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 MTSS1LQ765P7 747 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 ADGRA1Q86SQ6 560 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 TSPAN33Q86UF1 283 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 MB21D2Q8IYB1 491 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 TEX11Q8IYF3 940 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 SCCPDHQ8NBX0 429 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 AGBL3Q8NEM8 1001 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 GPT2Q8TD30 523 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 JAKMIP2Q96AA8 810 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms