RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	TMEM98	Q9Y2Y6	226 aa		4.19	□□□□□ -1.74
POLR2B-208	ENST00000478188	KCTD3	Q9Y597	815 aa		4.19	□□□□□ -1.74
POLR2B-208	ENST00000478188	DSP	P15924	2871 aa	Known RBP	4.19	□□□□□ -1.74
POLR2B-208	ENST00000478188	EPG5	Q9HCE0	2579 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188		F5H423	210 aa	Predicted RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	PPM1D	O15297	605 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	PMPCB	O75439	489 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	TCEA3	O75764	348 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	CA4	P22748	312 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	CCKBR	P32239	447 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	FASLG	P48023	281 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	MAZ	P56270	477 aa	Known RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	CCL7	P80098	99 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	E2F1	Q01094	437 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ITK	Q08881	620 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	KIF5A	Q12840	1032 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	SEMA5A	Q13591	1074 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ELOA	Q14241	798 aa	Known RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	PCSK7	Q16549	785 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	CYP1B1	Q16678	543 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ISX	Q2M1V0	245 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	P3H1	Q32P28	736 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ATP13A5	Q4VNC0	1218 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	C4orf17	Q53FE4	359 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	CFAP58	Q5T655	872 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	TTC27	Q6P3X3	843 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	KIAA1328	Q86T90	577 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	PRUNE1	Q86TP1	453 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	GKN2	Q86XP6	184 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	SFRP1	Q8N474	314 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ATL2	Q8NHH9	583 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	GLYATL1	Q969I3	302 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	LIN37	Q96GY3	246 aa	Predicted RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ZSCAN5A	Q9BUG6	496 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	FICD	Q9BVA6	458 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	MAK16	Q9BXY0	300 aa	Known RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ADGRE3	Q9BY15	652 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	SLC13A1	Q9BZW2	595 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	TSGA10	Q9BZW7	698 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	CDH19	Q9H159	772 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	FAM83D	Q9H4H8	585 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	TRABD	Q9H4I3	376 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	RMI1	Q9H9A7	625 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	PKD2L2	Q9NZM6	624 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ACSL6	Q9UKU0	697 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	PADI4	Q9UM07	663 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	GPR34	Q9UPC5	381 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	TRABD2B	A6NFA1	517 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	NEMP2	A6NFY4	417 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	GPR89A	B7ZAQ6	455 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	KCNN4	O15554	427 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	NUDT21	O43809	227 aa	Known RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	BRINP1	O60477	761 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	TJP3	O95049	919 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	AP2A1	O95782	977 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ATP1A1	P05023	1023 aa	Known RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	GPR89B	P0CG08	455 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ALPPL2	P10696	532 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	GLB1	P16278	677 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	KEL	P23276	732 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	CD1C	P29017	333 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	GPR1	P46091	355 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	GNPDA1	P46926	289 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	BLK	P51451	505 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	LRP8	Q14114	963 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ARHGEF7	Q14155	803 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	TAF1A	Q15573	450 aa	Predicted RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ZNF569	Q5MCW4	686 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	AGAP9	Q5VTM2	703 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	CCDC50	Q8IVM0	306 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	AGGF1	Q8N302	714 aa	eCLIP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ARL14	Q8N4G2	192 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	BMPER	Q8N8U9	685 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	PRELID2	Q8N945	189 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	TIMM29	Q9BSF4	260 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	TMEM121	Q9BTD3	319 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	UCK1	Q9HA47	277 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	CARS2	Q9HA77	564 aa	Known RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	CASS4	Q9NQ75	786 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	SEMA5B	Q9P283	1151 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	TBC1D29	Q9UFV1	150 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	RSPH14	Q9UHP6	348 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	SHOC2	Q9UQ13	582 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ARL5A	Q9Y689	179 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	CACNA1B	Q00975	2339 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	SNRNP200	O75643	2136 aa	Known RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	FER1L5	A0AVI2	2057 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	USP27X	A6NNY8	438 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	INPP4B	O15327	924 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	CS	O75390	466 aa	Known RBP	4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ECEL1	O95672	775 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ANXA6	P08133	673 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	PRSS56	P0CW18	603 aa		4.18	□□□□□ -1.74
POLR2B-208	ENST00000478188	ETS1	P14921	441 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms