RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 SIMC1Q8NDZ2 872 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 MDGA1Q8NFP4 955 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 ZNF507Q8TCN5 953 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 ZNF516Q92618 1163 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 TANKQ92844 425 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 ACDQ96AP0 544 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 KLHL29Q96CT2 875 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 MAGED4Q96JG8 741 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 FERMT1Q9BQL6 677 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 OR2B2Q9GZK3 357 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 XYLT2Q9H1B5 865 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 DUSP15Q9H1R2 295 aaPredicted RBP5.89□□□□□ -1.47
TRA2B-211ENST00000477939 BLZF1Q9H2G9 400 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 GHITMQ9H3K2 345 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 KLHL1Q9NR64 748 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 SMPD4Q9NXE4 827 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 EBF1Q9UH73 591 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 RSL24D1Q9UHA3 163 aaKnown RBP5.89□□□□□ -1.47
TRA2B-211ENST00000477939 LNPEPQ9UIQ6 1025 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 CAPN11Q9UMQ6 739 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 GAB2Q9UQC2 676 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 ZDHHC9Q9Y397 364 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 PCDHGA5Q9Y5G8 931 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 KLF2Q9Y5W3 355 aaPredicted RBP5.89□□□□□ -1.47
TRA2B-211ENST00000477939 CPQQ9Y646 472 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 CACNA1EQ15878 2313 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 MYH10P35580 1976 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 LAMA5O15230 3695 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 PI4KAP42356 2102 aa5.89□□□□□ -1.47
TRA2B-211ENST00000477939 LNP1A1A4G5 178 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 SERTM1A2A2V5 107 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 FAM221BA6H8Z2 402 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 ZNF98A6NK75 572 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 H7C0S8 307 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 TRIM77I1YAP6 450 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 K7ERQ8 282 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 O00370 1275 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 ANGPT2O15123 496 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 SCAMP1O15126 338 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 MAP3K13O43283 966 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 DENRO43583 198 aaKnown RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 TMEM127O75204 238 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 GOSR1O95249 250 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 PIGNO95427 931 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 HSPA4LO95757 839 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 DNTTP04053 509 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 KRT8P05787 483 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 GLAP06280 429 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 LYNP07948 512 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 PRG2P13727 222 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 HSD3B1P14060 373 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 HNRNPLP14866 589 aaKnown RBP eCLIP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 TNNI1P19237 187 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 BCKDHBP21953 392 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 TCEA1P23193 301 aaKnown RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 PON1P27169 355 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 RFC1P35251 1148 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 RECQLP46063 649 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 RPL5P46777 297 aaKnown RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 HOXA1P49639 335 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 DIO1P49895 249 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 TUBP50607 506 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 ALDH3A2P51648 485 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 DCDC1P59894 354 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 VSNL1P62760 191 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 TNNC1P63316 161 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 ABATP80404 500 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 SLC7A9P82251 487 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 C2orf54Q08AI8 447 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 IFRD2Q12894 506 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 ILF2Q12905 390 aaKnown RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 TAF10Q12962 218 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 PDCLQ13371 301 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 RFTN1Q14699 578 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 MORF4L2Q15014 288 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 STX1AQ16623 288 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 BMT2Q1RMZ1 405 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 EDRF1Q3B7T1 1238 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 ZNF829Q3KNS6 432 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 WDR72Q3MJ13 1102 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 MMEL1Q495T6 779 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 C2orf27AQ580R0 203 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 RUNDC3AQ59EK9 446 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 SNAP47Q5SQN1 464 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 PPP1R26Q5T8A7 1209 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 STPG1Q5TH74 334 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 PIK3R6Q5UE93 754 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 TDRD10Q5VZ19 366 aaKnown RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 PMS2CLQ68D20 193 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 SEZ6L2Q6UXD5 910 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 KIAA0907Q7Z7F0 614 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 SETD3Q86TU7 594 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 FAM35AQ86V20 835 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 FJX1Q86VR8 437 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 GRAMD1CQ8IYS0 662 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 FMR1NBQ8N0W7 255 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 CYP4X1Q8N118 509 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 TTC29Q8NA56 475 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-211ENST00000477939 B3GALNT2Q8NCR0 500 aa5.88□□□□□ -1.47
TRA2B-211ENST00000477939 TSTD1Q8NFU3 115 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms