RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 CRELD1Q96HD1 420 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 CMKLR1Q99788 373 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 NUDT22Q9BRQ3 303 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 B3GNT4Q9C0J1 378 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 KLC4Q9NSK0 619 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 KCNK4Q9NYG8 393 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 FEZ2Q9UHY8 353 aaPredicted RBP21.45■■□□□ 1.02
COL9A3-211ENST00000477612 LOXL2Q9Y4K0 774 aa21.45■■□□□ 1.02
COL9A3-211ENST00000477612 LOC400499M0QZD8 3231 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 IGHV5-10-1A0A0J9YXX1 117 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 C2orf81A6NN90 581 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 HGSO14964 777 aaPredicted RBP21.44■■□□□ 1.02
COL9A3-211ENST00000477612 NVLO15381 856 aaKnown RBP21.44■■□□□ 1.02
COL9A3-211ENST00000477612 STX7O15400 261 aaKnown RBP21.44■■□□□ 1.02
COL9A3-211ENST00000477612 KCNJ13O60928 360 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 XRCC1P18887 633 aaPredicted RBP21.44■■□□□ 1.02
COL9A3-211ENST00000477612 OLIG2Q13516 323 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 LDLRAP1Q5SW96 308 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 TMEM71Q6P5X7 295 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 ABRAXAS1Q6UWZ7 409 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 WASH2PQ6VEQ5 465 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 SLC38A3Q99624 504 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 STN1Q9H668 368 aaKnown RBP21.44■■□□□ 1.02
COL9A3-211ENST00000477612 WASH6PQ9NQA3 447 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 GUCA1BQ9UMX6 200 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 R3HDM2Q9Y2K5 976 aaKnown RBP21.44■■□□□ 1.02
COL9A3-211ENST00000477612 ARL5AQ9Y689 179 aa21.44■■□□□ 1.02
COL9A3-211ENST00000477612 TCRBV7S2A1N4TA0A589 114 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 AGAP14A8MT82 685 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 BUD23O43709 281 aaKnown RBP21.43■■□□□ 1.02
COL9A3-211ENST00000477612 UGT1A9O60656 530 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 HOXB3P14651 431 aaPredicted RBP21.43■■□□□ 1.02
COL9A3-211ENST00000477612 UGT1A6P19224 532 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 UGT1A1P22309 533 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 UGT1A4P22310 534 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 CA5AP35218 305 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 UGT1A3P35503 534 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 EPHA4P54764 986 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 UBE2IP63279 158 aaKnown RBP21.43■■□□□ 1.02
COL9A3-211ENST00000477612 PDE1BQ01064 536 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 C16orf72Q14CZ0 275 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 INSCQ1MX18 579 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 FAM151BQ6UXP7 276 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 ZNF398Q8TD17 642 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 RTP4Q96DX8 246 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.43■■□□□ 1.02
COL9A3-211ENST00000477612 UCK1Q9HA47 277 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 UGT1A7Q9HAW7 530 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 UGT1A10Q9HAW8 530 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 UGT1A8Q9HAW9 530 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 PRDM8Q9NQV8 689 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 CPNE7Q9UBL6 633 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 DNMT3AQ9Y6K1 912 aaPredicted RBP21.43■■□□□ 1.02
COL9A3-211ENST00000477612 IGSF10Q6WRI0 2623 aa21.43■■□□□ 1.02
COL9A3-211ENST00000477612 SNX2O60749 519 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 PTMAP06454 111 aaKnown RBP21.42■■□□□ 1.02
COL9A3-211ENST00000477612 JMJD7P0C870 316 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 THRAP10827 490 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 HGFP14210 728 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 SLC5A2P31639 672 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 CSF2RBP32927 897 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 DMPKQ09013 629 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 PTPRCAPQ14761 206 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 PHF19Q5T6S3 580 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 AGAP9Q5VTM2 703 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 NKAIN2Q5VXU1 208 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 WDR74Q6RFH5 385 aaPredicted RBP21.42■■□□□ 1.02
COL9A3-211ENST00000477612 CRTC3Q6UUV7 619 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 FAM71DQ8N9W8 422 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 AHCTF1Q8WYP5 2266 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 LRRC45Q96CN5 670 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 NAF1Q96HR8 494 aaKnown RBP21.42■■□□□ 1.02
COL9A3-211ENST00000477612 TBL1YQ9BQ87 522 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 APOL2Q9BQE5 337 aa21.42■■□□□ 1.02
COL9A3-211ENST00000477612 FRMD8P1Q9BZ68 369 aaPredicted RBP21.42■■□□□ 1.02
COL9A3-211ENST00000477612 ZCCHC2Q9C0B9 1178 aaKnown RBP21.42■■□□□ 1.02
COL9A3-211ENST00000477612 SCHIP1Q9P0W5 487 aaPredicted RBP21.42■■□□□ 1.02
COL9A3-211ENST00000477612 METTL18O95568 372 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 CRTAMO95727 393 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 ITIH1P19827 911 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 STIP1P31948 543 aaKnown RBP21.41■■□□□ 1.02
COL9A3-211ENST00000477612 ETV5P41161 510 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 UCNP55089 124 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 GDF10P55107 478 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 XIAPP98170 497 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 GTF2H3Q13889 308 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 GPRC6AQ5T6X5 926 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 MEI1Q5TIA1 1274 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 ARHGEF18Q6ZSZ5 1173 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 LRRC8AQ8IWT6 810 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 RASGEF1AQ8N9B8 481 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 OR4K2Q8NGD2 314 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 OR10G6Q8NH81 332 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 GDAP1Q8TB36 358 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 TTC25Q96NG3 672 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 TMEM121Q9BTD3 319 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 EPB41L1Q9H4G0 881 aa21.41■■□□□ 1.02
COL9A3-211ENST00000477612 AKAP7Q9P0M2 348 aaPredicted RBP21.41■■□□□ 1.02
COL9A3-211ENST00000477612 ZNF624Q9P2J8 865 aaPredicted RBP21.41■■□□□ 1.02
COL9A3-211ENST00000477612 PISDQ9UG56 409 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms