RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 CD48P09326 243 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 F8A1P23610 371 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 RPL10P27635 214 aaKnown RBP13.59□□□□□ -0.23
EPCAM-205ENST00000474691 SLC19A1P41440 591 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 CAPZBP47756 277 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 LEPRP48357 1165 aaKnown RBP13.59□□□□□ -0.23
EPCAM-205ENST00000474691 PMS2P54278 862 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 SLC25A11Q02978 314 aaKnown RBP13.59□□□□□ -0.23
EPCAM-205ENST00000474691 ACY1Q03154 408 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 NIPAL4Q0D2K0 466 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 TUBB3Q13509 450 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 DPYSL3Q14195 570 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 GALNT3Q14435 633 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 PLCL1Q15111 1095 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 PCSK7Q16549 785 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
EPCAM-205ENST00000474691 ZNF648Q5T619 568 aaPredicted RBP13.59□□□□□ -0.23
EPCAM-205ENST00000474691 APTXQ7Z2E3 356 aaKnown RBP13.59□□□□□ -0.23
EPCAM-205ENST00000474691 PRSS42Q7Z5A4 293 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 TRAPPC5Q8IUR0 188 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 TTC30BQ8N4P2 665 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 ARRDC2Q8TBH0 407 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 CPT1CQ8TCG5 803 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 GLYATL1Q969I3 302 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 TSGA13Q96PP4 275 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 PHF12Q96QT6 1004 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 SRPK1Q96SB4 655 aaKnown RBP13.59□□□□□ -0.23
EPCAM-205ENST00000474691 ZNF670Q9BS34 389 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 CTTNBP2NLQ9P2B4 639 aa13.59□□□□□ -0.23
EPCAM-205ENST00000474691 TLN1Q9Y490 2541 aaKnown RBP13.59□□□□□ -0.23
EPCAM-205ENST00000474691 UBA6A0AVT1 1052 aaPredicted RBP13.58□□□□□ -0.24
EPCAM-205ENST00000474691 RECKO95980 971 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 FGF5P12034 268 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 CD97P48960 835 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 PGDP52209 483 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 DRG2P55039 364 aaKnown RBP13.58□□□□□ -0.24
EPCAM-205ENST00000474691 TYRO3Q06418 890 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 AP1B1Q10567 949 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 ARMC6Q6NXE6 501 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 ADGRG6Q86SQ4 1221 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 BPHLQ86WA6 291 aaPredicted RBP13.58□□□□□ -0.24
EPCAM-205ENST00000474691 THAP4Q8WY91 577 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 UBXN4Q92575 508 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 FATE1Q969F0 183 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 WDR24Q96S15 920 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 TIMM29Q9BSF4 260 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 SLC25A23Q9BV35 468 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 ZCCHC2Q9C0B9 1178 aaKnown RBP13.58□□□□□ -0.24
EPCAM-205ENST00000474691 CBX8Q9HC52 389 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 SCHIP1Q9P0W5 487 aaPredicted RBP13.58□□□□□ -0.24
EPCAM-205ENST00000474691 LCMT1Q9UIC8 334 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 SLC30A1Q9Y6M5 507 aa13.58□□□□□ -0.24
EPCAM-205ENST00000474691 KCNK1O00180 336 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 KIF1CO43896 1103 aaKnown RBP13.57□□□□□ -0.24
EPCAM-205ENST00000474691 MTX2O75431 263 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 SERPING1P05155 500 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 KLK3P07288 261 aaPredicted RBP13.57□□□□□ -0.24
EPCAM-205ENST00000474691 NELFEP18615 380 aaKnown RBP13.57□□□□□ -0.24
EPCAM-205ENST00000474691 IL4RP24394 825 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 CCL11P51671 97 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 DCDC1P59894 354 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 SEMA5AQ13591 1074 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 GPR18Q14330 331 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 ANO6Q4KMQ2 910 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 TMTC4Q5T4D3 741 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 NT5DC3Q86UY8 548 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 GALNT11Q8NCW6 608 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 GPR26Q8NDV2 337 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 BRSK1Q8TDC3 778 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 CT55Q8WUE5 264 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 LRRN4Q8WUT4 740 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 RSC1A1Q92681 617 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 HDAC11Q96DB2 347 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 FCRL4Q96PJ5 515 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 PSMG3-AS1Q96PY0 264 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 GPR87Q9BY21 358 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 ACTL8Q9H568 366 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 MAGEE1Q9HCI5 957 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 OGFRQ9NZT2 677 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 ZNF624Q9P2J8 865 aaPredicted RBP13.57□□□□□ -0.24
EPCAM-205ENST00000474691 ZNF711Q9Y462 761 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 PCDHGA6Q9Y5G7 932 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 HEY1Q9Y5J3 304 aa13.57□□□□□ -0.24
EPCAM-205ENST00000474691 CLEC18AA5D8T8 446 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 OR52A4PA6NMU1 304 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 K7EM74 188 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 CHUKO15111 745 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 KCNJ13O60928 360 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 MBD3O95983 291 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 FURINP09958 794 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 PIRTP0C851 137 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 GNLYP22749 145 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 CDK18Q07002 472 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 ATP13A4Q4VNC1 1196 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 DNTTIP2Q5QJE6 756 aaKnown RBP13.56□□□□□ -0.24
EPCAM-205ENST00000474691 E4F1Q66K89 784 aaPredicted RBP13.56□□□□□ -0.24
EPCAM-205ENST00000474691 ALKBH5Q6P6C2 394 aaKnown RBP13.56□□□□□ -0.24
EPCAM-205ENST00000474691 ABRAXAS1Q6UWZ7 409 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 CLEC18BQ6UXF7 455 aa13.56□□□□□ -0.24
EPCAM-205ENST00000474691 SYVN1Q86TM6 617 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms