RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 AGAP9Q5VTM2 703 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 ABRAXAS1Q6UWZ7 409 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 KDELC2Q7Z4H8 507 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 PRSS42Q7Z5A4 293 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 C11orf96Q7Z7L8 435 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 NT5DC3Q86UY8 548 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 APOBEC4Q8WW27 367 aaKnown RBP13.18□□□□□ -0.3
COPS7B-219ENST00000474042 VPS35Q96QK1 796 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 SLC25A51Q9H1U9 297 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 TMPRSS11EQ9UL52 423 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 HEY1Q9Y5J3 304 aa13.18□□□□□ -0.3
COPS7B-219ENST00000474042 NBASA2RRP1 2371 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 SYCE3A1L190 88 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 CLEC18AA5D8T8 446 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 APOL1O14791 398 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 PPP1R12AO14974 1030 aaPredicted RBP13.17□□□□□ -0.3
COPS7B-219ENST00000474042 MTX2O75431 263 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 NDST3O95803 873 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 VIPP01282 170 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 SLC4A1P02730 911 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 TYRP1P17643 537 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 LEPRP48357 1165 aaKnown RBP13.17□□□□□ -0.3
COPS7B-219ENST00000474042 CDK18Q07002 472 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 AP1B1Q10567 949 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 MESDQ14696 234 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 PDK1Q15118 436 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 DEFB109BQ30KR1 87 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 ZFYVE27Q5T4F4 411 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 ATP1A1-AS1Q5TC04 95 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 CLEC18BQ6UXF7 455 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 NPNTQ6UXI9 565 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 WASH2PQ6VEQ5 465 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 TRIM48Q8IWZ4 208 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 CLEC18CQ8NCF0 446 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 RSC1A1Q92681 617 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 AGAP3Q96P47 875 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 TGM7Q96PF1 710 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 GPR63Q9BZJ6 419 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 ULBP3Q9BZM4 244 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 WASH6PQ9NQA3 447 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 IFNKQ9P0W0 207 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 KCTD3Q9Y597 815 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 SPO11Q9Y5K1 396 aa13.17□□□□□ -0.3
COPS7B-219ENST00000474042 MRPS18BQ9Y676 258 aaKnown RBP13.17□□□□□ -0.3
COPS7B-219ENST00000474042 SPENQ96T58 3664 aaKnown RBP13.17□□□□□ -0.3
COPS7B-219ENST00000474042 LRRK2Q5S007 2527 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 SSU72P8A0A1W2PR75 194 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 PDZK1P1A8MUH7 402 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 AURKAO14965 403 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 MT-CYBP00156 380 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-219ENST00000474042 KRT1P04264 644 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 FGF5P12034 268 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 TCN2P20062 427 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 SH3BP2P78314 561 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 FOXM1Q08050 763 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 GPR18Q14330 331 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 IL11RAQ14626 422 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 SEPT7Q16181 437 aaKnown RBP13.16□□□□□ -0.3
COPS7B-219ENST00000474042 PCSK7Q16549 785 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 LACTB2Q53H82 288 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-219ENST00000474042 RBM12BQ8IXT5 1001 aaKnown RBP13.16□□□□□ -0.3
COPS7B-219ENST00000474042 SPATA22Q8NHS9 363 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-219ENST00000474042 KLHL6Q8WZ60 621 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 OR6C1Q96RD1 312 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 SRPK1Q96SB4 655 aaKnown RBP13.16□□□□□ -0.3
COPS7B-219ENST00000474042 DNAJC7Q99615 494 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 RAB33BQ9H082 229 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 GLOD4Q9HC38 313 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 SLC40A1Q9NP59 571 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 ZNF71Q9NQZ8 489 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-219ENST00000474042 SEMA5BQ9P283 1151 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 EPHA6Q9UF33 1036 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 CROTQ9UKG9 612 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 DNAJC16Q9Y2G8 782 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 KCNMB2Q9Y691 235 aa13.16□□□□□ -0.3
COPS7B-219ENST00000474042 RELNP78509 3460 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 A0A0A6YYK5 440 aaPredicted RBP13.15□□□□□ -0.3
COPS7B-219ENST00000474042 OR52A4PA6NMU1 304 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 CDK14O94921 469 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 ZFXP17010 805 aaPredicted RBP13.15□□□□□ -0.3
COPS7B-219ENST00000474042 AMD1P17707 334 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 DLSTP36957 453 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 NOP2P46087 812 aaKnown RBP13.15□□□□□ -0.3
COPS7B-219ENST00000474042 DMPKQ09013 629 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 PRKD1Q15139 912 aaPredicted RBP13.15□□□□□ -0.3
COPS7B-219ENST00000474042 ATP13A5Q4VNC0 1218 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 TEX44Q53QW1 395 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 LRRC38Q5VT99 294 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 C16orf46Q6P387 395 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 C6orf15Q6UXA7 325 aaPredicted RBP13.15□□□□□ -0.3
COPS7B-219ENST00000474042 TTC30BQ8N4P2 665 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 GALNT6Q8NCL4 622 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 XPO4Q9C0E2 1151 aaKnown RBP13.15□□□□□ -0.3
COPS7B-219ENST00000474042 TP53TG5Q9Y2B4 290 aa13.15□□□□□ -0.3
COPS7B-219ENST00000474042 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.15□□□□□ -0.3
COPS7B-219ENST00000474042 GOLGA6L19H0YKK7 550 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 KIF1CO43896 1103 aaKnown RBP13.14□□□□□ -0.31
COPS7B-219ENST00000474042 RASSF9O75901 435 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms