RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 SEPHS2Q99611 448 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 APOL4Q9BPW4 351 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 HGH1Q9BTY7 390 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 FBXO44Q9H4M3 255 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 RMND5AQ9H871 391 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 TRNAU1APQ9NX07 287 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 TRMT6Q9UJA5 497 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 COL4A4P53420 1690 aaPredicted RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 LOC285095A0A1B0GVY8 99 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 KLK8O60259 260 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 NDUFS2O75306 463 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 ARHGEF15O94989 841 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 LINC00032P0C843 101 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 ZNF182P17025 639 aaPredicted RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 SERPINB1P30740 379 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 ADCYAP1R1P41586 468 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 CASP2P42575 452 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 MTHFRP42898 656 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 MAPKAPK2P49137 400 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 STC1P52823 247 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 MLLT6P55198 1093 aaPredicted RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 CDKN2DP55273 166 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 CDH13P55290 713 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 SOX4Q06945 474 aaPredicted RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 GRB7Q14451 532 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 AGAP7PQ5VUJ5 663 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 METTL2BQ6P1Q9 378 aaKnown RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 FAM171BQ6P995 826 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 ZNF549Q6P9A3 640 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 DPP9Q86TI2 863 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 SPATA2LQ8IUW3 424 aaPredicted RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 FAM126BQ8IXS8 530 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 SPARTQ8N0X7 666 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 ELMOD1Q8N336 334 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 FNDC5Q8NAU1 212 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 ABHD11Q8NFV4 315 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 OR52K2Q8NGK3 314 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 TRPM4Q8TD43 1214 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 ANKRD49Q8WVL7 239 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 IPCEF1Q8WWN9 437 aaPredicted RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 CAMKK2Q96RR4 588 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 CGREF1Q99674 301 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 CEP44Q9C0F1 390 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 CPNE5Q9HCH3 593 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 TLR6Q9Y2C9 796 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 TRIM17Q9Y577 477 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 MYBPHLA2RUH7 354 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 TRIM43BA6NCK2 446 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 TMEM247A6NEH6 219 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 C2orf81A6NN90 581 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 SLC28A1O00337 649 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 C1RP00736 705 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 RETP07949 1114 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 SERPINF2P08697 491 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 F7P08709 466 aaPredicted RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 ITGAMP11215 1152 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 NFKBIAP25963 317 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 CHRNA4P43681 627 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 TTPAP49638 278 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 CPT1AP50416 773 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 ST13P50502 369 aaKnown RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 SCNN1GP51170 649 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 KPNA1P52294 538 aaPredicted RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 TUBA1BP68363 451 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 MFSD10Q14728 455 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 FUT11Q495W5 492 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 OTUD3Q5T2D3 398 aaPredicted RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 TUBA1AQ71U36 451 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 LRRC8DQ7L1W4 858 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 R3HCC1LQ7Z5L2 792 aaKnown RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 NECAB2Q7Z6G3 386 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 IGFN1Q86VF2 1251 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 LACC1Q8IV20 430 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 ZCCHC7Q8N3Z6 543 aaKnown RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 ARRDC4Q8NCT1 418 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 OR2T12Q8NG77 320 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 PHF10Q8WUB8 498 aaKnown RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 FAM162AQ96A26 154 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 PTERQ96BW5 349 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 TBC1D20Q96BZ9 403 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 RMDN1Q96DB5 314 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 PABPC5Q96DU9 382 aaKnown RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 SH3YL1Q96HL8 342 aaPredicted RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 C17orf80Q9BSJ5 609 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 ASPSCR1Q9BZE9 553 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 SP140LQ9H930 580 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 AGO3Q9H9G7 860 aaKnown RBP6.06□□□□□ -1.44
HERC4-209ENST00000473533 TXNRD2Q9NNW7 524 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 FBXO8Q9NRD0 319 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 FAM118AQ9NWS6 357 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 NAALAD2Q9Y3Q0 740 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 CPQQ9Y646 472 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 AP1M2Q9Y6Q5 423 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 SLC16A6O15403 523 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 RGS14O43566 566 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 GABARAPO95166 117 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 NDST3O95803 873 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 MT-CO1P00395 513 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 OTCP00480 354 aa6.06□□□□□ -1.44
HERC4-209ENST00000473533 GOT2P00505 430 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms