RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 PID1Q7Z2X4 250 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 LRRTM4Q86VH4 590 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 ZC3H18Q86VM9 953 aaKnown RBP15.07■□□□□ 0
VTI1A-203ENST00000472892 FAM129CQ86XR2 697 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 ZNF567Q8N184 647 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 TTC30BQ8N4P2 665 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 HTR3CQ8WXA8 447 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 JPH3Q8WXH2 748 aaPredicted RBP15.07■□□□□ 0
VTI1A-203ENST00000472892 OXNAD1Q96HP4 312 aaPredicted RBP15.07■□□□□ 0
VTI1A-203ENST00000472892 MRGPRX2Q96LB1 330 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 TEFMQ96QE5 360 aaKnown RBP15.07■□□□□ 0
VTI1A-203ENST00000472892 TIMM29Q9BSF4 260 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 TBC1D10AQ9BXI6 508 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 TRIM5Q9C035 493 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 BPIFA1Q9NP55 256 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 IL26Q9NPH9 171 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 FBXO8Q9NRD0 319 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 ZNF624Q9P2J8 865 aaPredicted RBP15.07■□□□□ 0
VTI1A-203ENST00000472892 TFR2Q9UP52 801 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.07■□□□□ 0
VTI1A-203ENST00000472892 LILRA5A6NI73 299 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 HACD1B0YJ81 288 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 MTX2O75431 263 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 SLC19A1P41440 591 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 MARCKSL1P49006 195 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 TMEM115Q12893 351 aaPredicted RBP15.06■□□□□ 0
VTI1A-203ENST00000472892 NOMO1Q15155 1222 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 SPA17Q15506 151 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 INSCQ1MX18 579 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 ZDHHC20Q5W0Z9 365 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 C11orf63Q6NUN7 778 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 WASH2PQ6VEQ5 465 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 TMEM26Q6ZUK4 368 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 C11orf96Q7Z7L8 435 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 BRSK1Q8TDC3 778 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 EXTL1Q92935 676 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 RTP4Q96DX8 246 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 ZPBPQ9BS86 351 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 SLC12A9Q9BXP2 914 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 ZMYND15Q9H091 742 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 OSGEPL1Q9H4B0 414 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 WASH6PQ9NQA3 447 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.06■□□□□ 0
VTI1A-203ENST00000472892 HACD3Q9P035 362 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 IL17CQ9P0M4 197 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 KLHL8Q9P2G9 620 aaPredicted RBP15.06■□□□□ 0
VTI1A-203ENST00000472892 PILRAQ9UKJ1 303 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 TRHDEQ9UKU6 1024 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 COL6A6A6NMZ7 2263 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 PIEZO2Q9H5I5 2752 aa15.06■□□□□ 0
VTI1A-203ENST00000472892 SDK2Q58EX2 2172 aa15.05■□□□□ 0
VTI1A-203ENST00000472892 KCNJ13O60928 360 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 VIPP01282 170 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 ANKRD34CP0C6C1 535 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 BRAFP15056 766 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 CHRNA4P43681 627 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 MAPK9P45984 424 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 CYP4F2P78329 520 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 MPP3Q13368 585 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 XRCC4Q13426 336 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 SLC1A5Q15758 541 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 PPP2R5EQ16537 467 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 TBR1Q16650 682 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 AGAP9Q5VTM2 703 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 BBS12Q6ZW61 710 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 PLXDC1Q8IUK5 500 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 CACNA2D3Q8IZS8 1091 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 SLC25A41Q8N5S1 370 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 IL22RA1Q8N6P7 574 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 KRT35Q92764 455 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 RBM41Q96IZ5 413 aaKnown RBP15.05■□□□□ -0
VTI1A-203ENST00000472892 QKIQ96PU8 341 aaKnown RBP eCLIP15.05■□□□□ -0
VTI1A-203ENST00000472892 OGFRQ9NZT2 677 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 DNAJC16Q9Y2G8 782 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 SLC30A1Q9Y6M5 507 aa15.05■□□□□ -0
VTI1A-203ENST00000472892 MN1Q10571 1320 aaPredicted RBP15.05■□□□□ -0
VTI1A-203ENST00000472892 PDZK1P1A8MUH7 402 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 J3QKU1 62 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 RAD1O60671 282 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 C9P02748 559 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 HLA-DPA1P20036 260 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 IDSP22304 550 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 CYLC1P35663 651 aaPredicted RBP15.04■□□□□ -0
VTI1A-203ENST00000472892 SPAM1P38567 509 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 TNNT3P45378 269 aaPredicted RBP15.04■□□□□ -0
VTI1A-203ENST00000472892 COPS2P61201 443 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 PLA2G4EQ3MJ16 856 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 CEACAM20Q6UY09 585 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 DAAM2Q86T65 1068 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 CCDC50Q8IVM0 306 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 HAUS1Q96CS2 278 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 CTRCQ99895 268 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 ARHGAP9Q9BRR9 750 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 HEMGNQ9BXL5 484 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 SLC40A1Q9NP59 571 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 LUC7LQ9NQ29 371 aaKnown RBP15.04■□□□□ -0
VTI1A-203ENST00000472892 KLHL3Q9UH77 587 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 EFR3BQ9Y2G0 817 aa15.04■□□□□ -0
VTI1A-203ENST00000472892 APOC4-APOC2K7ER74 178 aa15.03■□□□□ -0
VTI1A-203ENST00000472892 TOX3O15405 576 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms