RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CCDC78A2IDD5 438 aa15.07■□□□□ 0
SDC3-203ENST00000471567 CCDC162PA2VCL2 907 aa15.07■□□□□ 0
SDC3-203ENST00000471567 FAM221BA6H8Z2 402 aa15.07■□□□□ 0
SDC3-203ENST00000471567 CFAP99D6REC4 459 aa15.07■□□□□ 0
SDC3-203ENST00000471567 TMEM63AO94886 807 aa15.07■□□□□ 0
SDC3-203ENST00000471567 GLB1P16278 677 aa15.07■□□□□ 0
SDC3-203ENST00000471567 VCLP18206 1134 aa15.07■□□□□ 0
SDC3-203ENST00000471567 ACRV1P26436 265 aa15.07■□□□□ 0
SDC3-203ENST00000471567 MGAT1P26572 445 aa15.07■□□□□ 0
SDC3-203ENST00000471567 AKT1P31749 480 aa15.07■□□□□ 0
SDC3-203ENST00000471567 TERF1P54274 439 aa15.07■□□□□ 0
SDC3-203ENST00000471567 DHX34Q14147 1143 aaKnown RBP15.07■□□□□ 0
SDC3-203ENST00000471567 HLTFQ14527 1009 aaKnown RBP eCLIP15.07■□□□□ 0
SDC3-203ENST00000471567 SMAD1Q15797 465 aaKnown RBP15.07■□□□□ 0
SDC3-203ENST00000471567 TMEM220Q6QAJ8 160 aa15.07■□□□□ 0
SDC3-203ENST00000471567 AFTPHQ6ULP2 937 aa15.07■□□□□ 0
SDC3-203ENST00000471567 CRTC3Q6UUV7 619 aa15.07■□□□□ 0
SDC3-203ENST00000471567 DHRS13Q6UX07 377 aa15.07■□□□□ 0
SDC3-203ENST00000471567 TMPRSS7Q7RTY8 843 aa15.07■□□□□ 0
SDC3-203ENST00000471567 CAND1Q86VP6 1230 aaKnown RBP15.07■□□□□ 0
SDC3-203ENST00000471567 TMPRSS12Q86WS5 348 aa15.07■□□□□ 0
SDC3-203ENST00000471567 TRAPPC5Q8IUR0 188 aa15.07■□□□□ 0
SDC3-203ENST00000471567 CACTIN-AS1Q8N1I8 211 aa15.07■□□□□ 0
SDC3-203ENST00000471567 HDAC10Q969S8 669 aa15.07■□□□□ 0
SDC3-203ENST00000471567 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.07■□□□□ 0
SDC3-203ENST00000471567 DCUN1D1Q96GG9 259 aa15.07■□□□□ 0
SDC3-203ENST00000471567 C16orf45Q96MC5 204 aaPredicted RBP15.07■□□□□ 0
SDC3-203ENST00000471567 ZNF778Q96MU6 729 aa15.07■□□□□ 0
SDC3-203ENST00000471567 KIFC1Q9BW19 673 aa15.07■□□□□ 0
SDC3-203ENST00000471567 FAM96AQ9H5X1 160 aa15.07■□□□□ 0
SDC3-203ENST00000471567 CHRAC1Q9NRG0 131 aa15.07■□□□□ 0
SDC3-203ENST00000471567 KLC4Q9NSK0 619 aa15.07■□□□□ 0
SDC3-203ENST00000471567 SLC2A6Q9UGQ3 507 aa15.07■□□□□ 0
SDC3-203ENST00000471567 ANGPTL2Q9UKU9 493 aa15.07■□□□□ 0
SDC3-203ENST00000471567 KCNK6Q9Y257 313 aa15.07■□□□□ 0
SDC3-203ENST00000471567 MYLKQ15746 1914 aa15.07■□□□□ 0
SDC3-203ENST00000471567 ARHGEF17Q96PE2 2063 aaPredicted RBP15.07■□□□□ 0
SDC3-203ENST00000471567 NCOR2Q9Y618 2525 aa15.06■□□□□ 0
SDC3-203ENST00000471567 IGLV3-16A0A075B6K0 115 aa15.06■□□□□ 0
SDC3-203ENST00000471567 MAGEB16A2A368 324 aa15.06■□□□□ 0
SDC3-203ENST00000471567 KLHL33A6NCF5 533 aa15.06■□□□□ 0
SDC3-203ENST00000471567 PRR19A6NJB7 356 aa15.06■□□□□ 0
SDC3-203ENST00000471567 KIF2AO00139 706 aaPredicted RBP15.06■□□□□ 0
SDC3-203ENST00000471567 DNALI1O14645 258 aaPredicted RBP15.06■□□□□ 0
SDC3-203ENST00000471567 NUDT21O43809 227 aaKnown RBP15.06■□□□□ 0
SDC3-203ENST00000471567 HYAL3O43820 417 aaPredicted RBP15.06■□□□□ 0
SDC3-203ENST00000471567 OPA1O60313 960 aa15.06■□□□□ 0
SDC3-203ENST00000471567 SLC2A4P14672 509 aa15.06■□□□□ 0
SDC3-203ENST00000471567 PNLIPP16233 465 aa15.06■□□□□ 0
SDC3-203ENST00000471567 FOXN2P32314 431 aa15.06■□□□□ 0
SDC3-203ENST00000471567 CTSCP53634 463 aa15.06■□□□□ 0
SDC3-203ENST00000471567 PRAMEP78395 509 aa15.06■□□□□ 0
SDC3-203ENST00000471567 INSCQ1MX18 579 aa15.06■□□□□ 0
SDC3-203ENST00000471567 BCL7AQ4VC05 210 aa15.06■□□□□ 0
SDC3-203ENST00000471567 RNASEH2BQ5TBB1 312 aaKnown RBP15.06■□□□□ 0
SDC3-203ENST00000471567 LYPLAL1Q5VWZ2 237 aa15.06■□□□□ 0
SDC3-203ENST00000471567 TAS2R42Q7RTR8 314 aa15.06■□□□□ 0
SDC3-203ENST00000471567 C11orf96Q7Z7L8 435 aa15.06■□□□□ 0
SDC3-203ENST00000471567 HOOK3Q86VS8 718 aa15.06■□□□□ 0
SDC3-203ENST00000471567 SERPINA9Q86WD7 417 aa15.06■□□□□ 0
SDC3-203ENST00000471567 JAMLQ86YT9 394 aa15.06■□□□□ 0
SDC3-203ENST00000471567 NAGSQ8N159 534 aa15.06■□□□□ 0
SDC3-203ENST00000471567 SPATA4Q8NEY3 305 aa15.06■□□□□ 0
SDC3-203ENST00000471567 OR4L1Q8NH43 312 aa15.06■□□□□ 0
SDC3-203ENST00000471567 WDR48Q8TAF3 677 aa15.06■□□□□ 0
SDC3-203ENST00000471567 TTC1Q99614 292 aa15.06■□□□□ 0
SDC3-203ENST00000471567 TREX1Q9NSU2 369 aa15.06■□□□□ 0
SDC3-203ENST00000471567 SYBUQ9NX95 663 aa15.06■□□□□ 0
SDC3-203ENST00000471567 SLC23A2Q9UGH3 650 aa15.06■□□□□ 0
SDC3-203ENST00000471567 SOX13Q9UN79 622 aa15.06■□□□□ 0
SDC3-203ENST00000471567 NEUROG3Q9Y4Z2 214 aa15.06■□□□□ 0
SDC3-203ENST00000471567 PLXNB3Q9ULL4 1909 aa15.05■□□□□ 0
SDC3-203ENST00000471567 A6NCN8 305 aa15.05■□□□□ -0
SDC3-203ENST00000471567 SDR42E2A6NKP2 422 aa15.05■□□□□ -0
SDC3-203ENST00000471567 OR5K4A6NMS3 321 aa15.05■□□□□ -0
SDC3-203ENST00000471567 SMAPO00193 183 aa15.05■□□□□ -0
SDC3-203ENST00000471567 POP7O75817 140 aaKnown RBP15.05■□□□□ -0
SDC3-203ENST00000471567 GOT2P00505 430 aaKnown RBP15.05■□□□□ -0
SDC3-203ENST00000471567 ATP1B2P14415 290 aaPredicted RBP15.05■□□□□ -0
SDC3-203ENST00000471567 IVDP26440 423 aa15.05■□□□□ -0
SDC3-203ENST00000471567 PPARGP37231 505 aaPredicted RBP15.05■□□□□ -0
SDC3-203ENST00000471567 MAGEA3P43357 314 aa15.05■□□□□ -0
SDC3-203ENST00000471567 CDKN1CP49918 316 aaPredicted RBP15.05■□□□□ -0
SDC3-203ENST00000471567 CRADDP78560 199 aa15.05■□□□□ -0
SDC3-203ENST00000471567 B4GALNT1Q00973 533 aa15.05■□□□□ -0
SDC3-203ENST00000471567 DMPKQ09013 629 aa15.05■□□□□ -0
SDC3-203ENST00000471567 ITIH4Q14624 930 aa15.05■□□□□ -0
SDC3-203ENST00000471567 PERM1Q5SV97 790 aa15.05■□□□□ -0
SDC3-203ENST00000471567 IYDQ6PHW0 289 aa15.05■□□□□ -0
SDC3-203ENST00000471567 WASH2PQ6VEQ5 465 aa15.05■□□□□ -0
SDC3-203ENST00000471567 CERS6Q6ZMG9 384 aa15.05■□□□□ -0
SDC3-203ENST00000471567 ZNF572Q7Z3I7 529 aaPredicted RBP15.05■□□□□ -0
SDC3-203ENST00000471567 AMZ2Q86W34 360 aa15.05■□□□□ -0
SDC3-203ENST00000471567 PIANPQ8IYJ0 282 aa15.05■□□□□ -0
SDC3-203ENST00000471567 SFRP1Q8N474 314 aa15.05■□□□□ -0
SDC3-203ENST00000471567 ARL14Q8N4G2 192 aa15.05■□□□□ -0
SDC3-203ENST00000471567 OR6P1Q8NGX9 317 aa15.05■□□□□ -0
SDC3-203ENST00000471567 MAPK15Q8TD08 544 aa15.05■□□□□ -0
SDC3-203ENST00000471567 SGF29Q96ES7 293 aa15.05■□□□□ -0
SDC3-203ENST00000471567 LINC00615Q96LM1 132 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms