RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 LYSMD1Q96S90 227 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 TDRD1Q9BXT4 1180 aaKnown RBP9.01□□□□□ -0.97
CPSF4-211ENST00000471455 CARD9Q9H257 536 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 OSGEPL1Q9H4B0 414 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 FAM83DQ9H4H8 585 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 RAD18Q9NS91 495 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 SIDT1Q9NXL6 827 aaKnown RBP9.01□□□□□ -0.97
CPSF4-211ENST00000471455 CPNE7Q9UBL6 633 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 TBC1D29Q9UFV1 150 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 VPS4AQ9UN37 437 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 KCNK6Q9Y257 313 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 PLAAQ9Y263 795 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 TP53TG5Q9Y2B4 290 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 TTLL3Q9Y4R7 772 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 KCNMB2Q9Y691 235 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 MYO9AB2RTY4 2548 aa9.01□□□□□ -0.97
CPSF4-211ENST00000471455 C1orf232A0A0U1RR37 186 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 A6NCN8 305 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 LRRC53A6NM62 1247 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 C21orf140B9A014 251 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 GRID2O43424 1007 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 RASSF9O75901 435 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 VIPP01282 170 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 C9P02748 559 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 PDHA1P08559 390 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 AMD1P17707 334 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 MX2P20592 715 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 CASP14P31944 242 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 GARSP41250 739 aaKnown RBP9□□□□□ -0.97
CPSF4-211ENST00000471455 CLCNKAP51800 687 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 PMS2P54278 862 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 FILIP1LQ4L180 1135 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 ANKRD20A8PQ5CZ79 823 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 ALG1LQ6GMV1 187 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 ASB18Q6ZVZ8 466 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 TP53INP2Q8IXH6 220 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 AOPEPQ8N6M6 819 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 LPCAT1Q8NF37 534 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 FATE1Q969F0 183 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 ZDHHC12Q96GR4 267 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 C9orf72Q96LT7 481 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 ZNF830Q96NB3 372 aaPredicted RBP9□□□□□ -0.97
CPSF4-211ENST00000471455 SYT11Q9BT88 431 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 ADGRE3Q9BY15 652 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 ZNF768Q9H5H4 540 aaKnown RBP9□□□□□ -0.97
CPSF4-211ENST00000471455 APMAPQ9HDC9 416 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 POT1Q9NUX5 634 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 MYO1AQ9UBC5 1043 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 LNPEPQ9UIQ6 1025 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 CROTQ9UKG9 612 aa9□□□□□ -0.97
CPSF4-211ENST00000471455 G3BP2Q9UN86 482 aaKnown RBP9□□□□□ -0.97
CPSF4-211ENST00000471455 BLACEA4D250 179 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 PDZK1P1A8MUH7 402 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 MATN3O15232 486 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 MTSS1O43312 755 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 NUAK1O60285 661 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 KATNA1O75449 491 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 UBXN7O94888 489 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 AGFG2O95081 481 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 NDUFA10O95299 355 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 EML2O95834 649 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 ATP1A1P05023 1023 aaKnown RBP8.99□□□□□ -0.97
CPSF4-211ENST00000471455 RARAP10276 462 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 VCLP18206 1134 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 XRCC1P18887 633 aaPredicted RBP8.99□□□□□ -0.97
CPSF4-211ENST00000471455 IL1R2P27930 398 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 PRKCIP41743 596 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 CAPZBP47756 277 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 SPINT3P49223 89 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 UBE2IP63279 158 aaKnown RBP8.99□□□□□ -0.97
CPSF4-211ENST00000471455 KLHL30Q0D2K2 578 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 GALNT2Q10471 571 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 IFI16Q16666 785 aaKnown RBP8.99□□□□□ -0.97
CPSF4-211ENST00000471455 HADHQ16836 314 aaKnown RBP8.99□□□□□ -0.97
CPSF4-211ENST00000471455 INSCQ1MX18 579 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.99□□□□□ -0.97
CPSF4-211ENST00000471455 HENMT1Q5T8I9 393 aaKnown RBP8.99□□□□□ -0.97
CPSF4-211ENST00000471455 FHL5Q5TD97 284 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 PDPK2PQ6A1A2 396 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 KLHL35Q6PF15 583 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 RFLNAQ6ZTI6 216 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 TMEM26Q6ZUK4 368 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 PRSS42Q7Z5A4 293 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 PPP1R3BQ86XI6 285 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 NIPA2Q8N8Q9 360 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 GALNT6Q8NCL4 622 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 GALNT11Q8NCW6 608 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 MAML1Q92585 1016 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 TGM7Q96PF1 710 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 PSMG3-AS1Q96PY0 264 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 OR6C1Q96RD1 312 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 AGAP2Q99490 1192 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 ZSCAN5AQ9BUG6 496 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 MLPHQ9BV36 600 aaPredicted RBP8.99□□□□□ -0.97
CPSF4-211ENST00000471455 TBC1D10AQ9BXI6 508 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 TRIM7Q9C029 511 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 TWSG1Q9GZX9 223 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 NAT10Q9H0A0 1025 aaKnown RBP8.99□□□□□ -0.97
CPSF4-211ENST00000471455 HAUS4Q9H6D7 363 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 PCDH9Q9HC56 1237 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms