RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 LINGO1Q96FE5 620 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 EGLN2Q96KS0 407 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 SMC6Q96SB8 1091 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 BARD1Q99728 777 aaKnown RBP3.79□□□□□ -1.8
BRCA2-202ENST00000470094 SEMA3CQ99985 751 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 TRMT61BQ9BVS5 477 aaKnown RBP3.79□□□□□ -1.8
BRCA2-202ENST00000470094 TMEM39BQ9GZU3 492 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 LRMDAQ9H2I8 198 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 EPB41L5Q9HCM4 733 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 ZNF334Q9HCZ1 680 aaPredicted RBP3.79□□□□□ -1.8
BRCA2-202ENST00000470094 POLG2Q9UHN1 485 aa3.79□□□□□ -1.8
BRCA2-202ENST00000470094 CORO1CQ9ULV4 474 aaPredicted RBP3.79□□□□□ -1.8
BRCA2-202ENST00000470094 FSD2A1L4K1 749 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 MYO1GB0I1T2 1018 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 EIF3DO15371 548 aaKnown RBP eCLIP3.78□□□□□ -1.8
BRCA2-202ENST00000470094 USO1O60763 962 aaKnown RBP3.78□□□□□ -1.8
BRCA2-202ENST00000470094 GPC4O75487 556 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 SLC22A3O75751 556 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 HIST1H2ABP04908 130 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 HIST1H2ADP20671 130 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 NR2F2P24468 414 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 AHRP35869 848 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 MMP14P50281 582 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 GAGE5Q13069 117 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 GAGE6Q13070 117 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 PCGF3Q3KNV8 242 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 GKAP1Q5VSY0 366 aaPredicted RBP3.78□□□□□ -1.8
BRCA2-202ENST00000470094 SNX30Q5VWJ9 437 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 KLHL35Q6PF15 583 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 IKBIPQ70UQ0 350 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 BRINP3Q76B58 766 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 HIST3H2AQ7L7L0 130 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 CCDC190Q86UF4 302 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 TEX11Q8IYF3 940 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 PM20D2Q8IYS1 436 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 CIARTQ8N365 385 aaPredicted RBP3.78□□□□□ -1.8
BRCA2-202ENST00000470094 EMC1Q8N766 993 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 SNRNP27Q8WVK2 155 aaKnown RBP3.78□□□□□ -1.8
BRCA2-202ENST00000470094 PHF21AQ96BD5 680 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 ITPAQ9BY32 194 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 KAT14Q9H8E8 782 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 TCP11L1Q9NUJ3 509 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 HCFC1R1Q9NWW0 138 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 MTMR10Q9NXD2 777 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 CLIC5Q9NZA1 410 aa3.78□□□□□ -1.8
BRCA2-202ENST00000470094 MARCH4Q9P2E8 410 aaPredicted RBP3.78□□□□□ -1.8
BRCA2-202ENST00000470094 A0A1W2PP11 408 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 FAM72CH0Y354 149 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 TMEM178BH3BS89 294 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 OGG1O15527 345 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 BUD23O43709 281 aaKnown RBP3.77□□□□□ -1.81
BRCA2-202ENST00000470094 SYNGR3O43761 229 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 ZBED4O75132 1171 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 GFPT2O94808 682 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 ACADMP11310 421 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 ACTN1P12814 892 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 RARGP13631 454 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 ZNF23P17027 643 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 ANXA7P20073 488 aaKnown RBP3.77□□□□□ -1.81
BRCA2-202ENST00000470094 DRG2P55039 364 aaKnown RBP3.77□□□□□ -1.81
BRCA2-202ENST00000470094 MLLT10P55197 1068 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 NAP1L1P55209 391 aaKnown RBP3.77□□□□□ -1.81
BRCA2-202ENST00000470094 EIF4A2Q14240 407 aaKnown RBP3.77□□□□□ -1.81
BRCA2-202ENST00000470094 CRYMQ14894 314 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 KRTAP24-1Q3LI83 254 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 OTUD3Q5T2D3 398 aaPredicted RBP3.77□□□□□ -1.81
BRCA2-202ENST00000470094 FAM72AQ5TYM5 149 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 ITPRIPL1Q6GPH6 555 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 FAM72DQ6L9T8 149 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 TSPAN33Q86UF1 283 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 FAM72BQ86X60 149 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 TICAM1Q8IUC6 712 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 TMTC2Q8N394 836 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 USP6NLQ92738 828 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 MOAP1Q96BY2 351 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 ERP27Q96DN0 273 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 ELMOD3Q96FG2 381 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 CMTM3Q96MX0 182 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 NUDCD1Q96RS6 583 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 UPF2Q9HAU5 1272 aaKnown RBP3.77□□□□□ -1.81
BRCA2-202ENST00000470094 FAM118AQ9NWS6 357 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 LYVE1Q9Y5Y7 322 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 SESN1Q9Y6P5 492 aa3.77□□□□□ -1.81
BRCA2-202ENST00000470094 IGLV5-45A0A087WSX0 123 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 CTAGE9A4FU28 777 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 PI4KAP2A4QPH2 592 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 PRR23AA6NEV1 266 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 A8MZ25 164 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 ANKRD66B4E2M5 251 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 SMAD9O15198 467 aaKnown RBP3.76□□□□□ -1.81
BRCA2-202ENST00000470094 FIBPO43427 364 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 HS6ST1O60243 411 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 PLGP00747 810 aaPredicted RBP3.76□□□□□ -1.81
BRCA2-202ENST00000470094 IGHV4-39P01824 125 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 PRSS1P07477 247 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 CTAGE8P0CG41 777 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 TCEA1P23193 301 aaKnown RBP3.76□□□□□ -1.81
BRCA2-202ENST00000470094 ARCN1P48444 511 aaKnown RBP3.76□□□□□ -1.81
BRCA2-202ENST00000470094 GPR143P51810 404 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 CLNS1AP54105 237 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms