RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 GRIP2Q9C0E4 1043 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 CAB39LQ9H9S4 337 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 SPAG4Q9NPE6 437 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 NLE1Q9NVX2 485 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 WBP1LQ9NX94 342 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 RAD51BO15315 384 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 HDAC3O15379 428 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 ZNF7P17097 686 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 TTLL9Q3SXZ7 439 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 PPM1JQ5JR12 505 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 DENND5AQ6IQ26 1287 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 FAM92BQ6ZTR7 304 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 CYP4Z1Q86W10 505 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 RBM12BQ8IXT5 1001 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 TDRD1Q9BXT4 1180 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 YTHDF1Q9BYJ9 559 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 DDX18Q9NVP1 670 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 SP100P23497 879 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 ZRANB3Q5FWF4 1079 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 MTX3Q5HYI7 312 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 PDE12Q6L8Q7 609 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 CGB2Q6NT52 195 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 PACRGLQ8N7B6 248 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 C17orf80Q9BSJ5 609 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 ZBP1Q9H171 429 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 ARHGEF3Q9NR81 526 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 ATP6V1HQ9UI12 483 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 PTBP2Q9UKA9 531 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 ING4Q9UNL4 249 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 TLL1O43897 1013 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 SLC4A1P02730 911 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 DLDP09622 509 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 CHRNA4P43681 627 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 BCAP31P51572 246 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 PTPN5P54829 565 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 RBBP7Q16576 425 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 SPATS1Q496A3 300 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 ATP6AP1LQ52LC2 224 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 ZCCHC23Q6ZST2 131 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 RAB2BQ8WUD1 216 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 DPF3Q92784 378 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 CRISPLD1Q9H336 500 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 PLAC1Q9HBJ0 212 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 HCSTQ9UBK5 93 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 E2F8A0AVK6 867 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 ADAM12O43184 909 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 IL6P05231 212 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 CPA2P48052 419 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 OLIG2Q13516 323 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 ZNF544Q6NX49 715 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 OTOP2Q7RTS6 562 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 DRAXINQ8NBI3 349 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 STAG3L4Q8TBR4 150 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 TCF25Q9BQ70 676 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 CORO1BQ9BR76 489 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 PIDD1Q9HB75 910 aa6.94□□□□□ -1.3
GAPVD1-215ENST00000470056 NEMP1O14524 444 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 FKBP9O95302 570 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 FGF3P11487 239 aaPredicted RBP6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 MAGEA10P43363 369 aaPredicted RBP6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 CSNK1DP48730 415 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 PGFP49763 221 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 DNAJB13P59910 316 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 POLR2LP62875 67 aaKnown RBP6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 GALNT3Q14435 633 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 PDZK1Q5T2W1 519 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 IYDQ6PHW0 289 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 TRIM74Q86UV6 250 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 TRIM73Q86UV7 250 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 DENND6AQ8IWF6 608 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 CYP4Z2PQ8N1L4 340 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 ACTRT2Q8TDY3 377 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 Q96MT0 163 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 C19orf43Q9BQ61 176 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 RTKNQ9BST9 563 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 C12orf65Q9H3J6 166 aaKnown RBP6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 GKN1Q9NS71 199 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 CCDC59Q9P031 241 aaKnown RBP6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 H2AFY2Q9P0M6 372 aaPredicted RBP6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 TMCC3Q9ULS5 477 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 PCDHB1Q9Y5F3 818 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 RGS5O15539 181 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 WBP4O75554 376 aaKnown RBP6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 SLC6A4P31645 630 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 GLRBP48167 497 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 KCNJ2P63252 427 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 CSNK2BP67870 215 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 CACNG1Q06432 222 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 SQLEQ14534 574 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 TXNDC11Q6PKC3 985 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 HM13Q8TCT9 377 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 EXT2Q93063 718 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 SAMD11Q96NU1 681 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 SLC17A6Q9P2U8 582 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 GUCY1B2O75343 617 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 HOXD9P28356 352 aaPredicted RBP6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 TGFBR2P37173 567 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 ARCN1P48444 511 aaKnown RBP6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 STC1P52823 247 aa6.93□□□□□ -1.3
GAPVD1-215ENST00000470056 CCDC85BQ15834 202 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms